| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is add
Identifier: 170756064
GI number: 170756064
Start: 1096034
End: 1097041
Strand: Reverse
Name: add
Synonym: CLD_3575
Alternate gene names: 170756064
Gene position: 1097041-1096034 (Counterclockwise)
Preceding gene: 170754293
Following gene: 170754218
Centisome position: 27.72
GC content: 29.66
Gene sequence:
>1008_bases TTGAATTTTAAAAAACTTCCTAAAATAGAGTTACATTGCCATTTAGATGGTTCATTGAGAGTAGACACAATATTAGATAT AGCTAAAAAAGATAATATCCCTCTTCCTAGCTATAATAAAAAGGAGCTTATAAATTATGTTTCCATAATGGATGACTGTA ATTCCCTAGATGAATACTTAAATAAGTTTTTTATACCTAACAAAGTTATGCAAACAAAGGAAAATTTAAAAAGAATAGCA TTTGAGTTATTAGAAGATGTTGCAGCAGATAATGTAAAATATATAGAAGTAAGATTTGCCCCTCTTTTACATGTTGAAAA AGGATTAAATATTGAAGAAATTATAGAAAGTGTACTGGAAGGGATTAAAGAAGCCGAAAAGCTTTATGATATAAAAGGTA ATTTAATATTAGGTTGTATGAGAAATATGGATATTCCTTCAGCCTTTGAAGTTGTAAAAAAAGGGGCCAAATTTATTGGA AAAGGTGTTGTTGCTATAGACCTTTGTGCTGGTGAAGAACCCCATTTCCCAGGAAAATATATAGAAGTTTTAAAACTAGC TAAAGAATATGGTTATAGAATAACTATCCATGCTGGAGAAGCTGGCGTAGGAGAAAATGTTTTAGAAGCTATAAATCTTT TAAATGCTGAAAGAATAGGCCATGGAATATATATTAAAGATTGTGCTGAAGCTTATAAGCTTGTAAAAGAAAAAAATATT CCACTGGAGATGTGTCCAACAAGTAATCTCCATACTAAAGCTTCTGAAAGCTATGAAGCCCATCCTTTTATGGATTTTCT AAAAGATGGTATTAAGGTTACTATTAATACAGATAATATGACAGTATCTAATACTACCATAACAAAAGAACTAGAAATGC TTAATAAGTTTTGTGGTTTGTCTATAGAAGATTATAAAATACTATATCTAAATGCAGTAGAGGCATCTTTTGCATCCTCT GAAACAAAAGAAGTACTTAAATCATATGTTAAGGAAATTACGGCTTAA
Upstream 100 bases:
>100_bases TTACACAAATTAAATAATAAATTATAATTAAGTTTAACATTTTTAATAGATCTATATTATAAGAAATTACCTTAATCGGT AATAGCAAGGAGTGACTAAT
Downstream 100 bases:
>100_bases AAGCTTTTAAATGTTAAGAATTAAAACAAGAAATACTTTTAGTCAATAGATAGCTATAAAAATAAAAAATACTAATATTT GTGCCTTAATATTTCAGCTA
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNFKKLPKIELHCHLDGSLRVDTILDIAKKDNIPLPSYNKKELINYVSIMDDCNSLDEYLNKFFIPNKVMQTKENLKRIA FELLEDVAADNVKYIEVRFAPLLHVEKGLNIEEIIESVLEGIKEAEKLYDIKGNLILGCMRNMDIPSAFEVVKKGAKFIG KGVVAIDLCAGEEPHFPGKYIEVLKLAKEYGYRITIHAGEAGVGENVLEAINLLNAERIGHGIYIKDCAEAYKLVKEKNI PLEMCPTSNLHTKASESYEAHPFMDFLKDGIKVTINTDNMTVSNTTITKELEMLNKFCGLSIEDYKILYLNAVEASFASS ETKEVLKSYVKEITA
Sequences:
>Translated_335_residues MNFKKLPKIELHCHLDGSLRVDTILDIAKKDNIPLPSYNKKELINYVSIMDDCNSLDEYLNKFFIPNKVMQTKENLKRIA FELLEDVAADNVKYIEVRFAPLLHVEKGLNIEEIIESVLEGIKEAEKLYDIKGNLILGCMRNMDIPSAFEVVKKGAKFIG KGVVAIDLCAGEEPHFPGKYIEVLKLAKEYGYRITIHAGEAGVGENVLEAINLLNAERIGHGIYIKDCAEAYKLVKEKNI PLEMCPTSNLHTKASESYEAHPFMDFLKDGIKVTINTDNMTVSNTTITKELEMLNKFCGLSIEDYKILYLNAVEASFASS ETKEVLKSYVKEITA >Mature_335_residues MNFKKLPKIELHCHLDGSLRVDTILDIAKKDNIPLPSYNKKELINYVSIMDDCNSLDEYLNKFFIPNKVMQTKENLKRIA FELLEDVAADNVKYIEVRFAPLLHVEKGLNIEEIIESVLEGIKEAEKLYDIKGNLILGCMRNMDIPSAFEVVKKGAKFIG KGVVAIDLCAGEEPHFPGKYIEVLKLAKEYGYRITIHAGEAGVGENVLEAINLLNAERIGHGIYIKDCAEAYKLVKEKNI PLEMCPTSNLHTKASESYEAHPFMDFLKDGIKVTINTDNMTVSNTTITKELEMLNKFCGLSIEDYKILYLNAVEASFASS ETKEVLKSYVKEITA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=339, Percent_Identity=32.7433628318584, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI226693318, Length=340, Percent_Identity=24.4117647058824, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI61175224, Length=252, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1787910, Length=327, Percent_Identity=33.0275229357798, Blast_Score=187, Evalue=1e-48, Organism=Caenorhabditis elegans, GI32565969, Length=346, Percent_Identity=30.3468208092486, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17538512, Length=346, Percent_Identity=30.3468208092486, Blast_Score=146, Evalue=1e-35, Organism=Caenorhabditis elegans, GI115537133, Length=326, Percent_Identity=27.3006134969325, Blast_Score=91, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324188, Length=336, Percent_Identity=24.702380952381, Blast_Score=122, Evalue=7e-29, Organism=Drosophila melanogaster, GI24645260, Length=338, Percent_Identity=29.2899408284024, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37748; Mature: 37748
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKKLPKIELHCHLDGSLRVDTILDIAKKDNIPLPSYNKKELINYVSIMDDCNSLDEYL CCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NKFFIPNKVMQTKENLKRIAFELLEDVAADNVKYIEVRFAPLLHVEKGLNIEEIIESVLE HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHH GIKEAEKLYDIKGNLILGCMRNMDIPSAFEVVKKGAKFIGKGVVAIDLCAGEEPHFPGKY HHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH IEVLKLAKEYGYRITIHAGEAGVGENVLEAINLLNAERIGHGIYIKDCAEAYKLVKEKNI HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCC PLEMCPTSNLHTKASESYEAHPFMDFLKDGIKVTINTDNMTVSNTTITKELEMLNKFCGL CEEECCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCEEECCCHHHHHHHHHHHHHCC SIEDYKILYLNAVEASFASSETKEVLKSYVKEITA CCCCEEEEEEEEHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNFKKLPKIELHCHLDGSLRVDTILDIAKKDNIPLPSYNKKELINYVSIMDDCNSLDEYL CCCCCCCCEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NKFFIPNKVMQTKENLKRIAFELLEDVAADNVKYIEVRFAPLLHVEKGLNIEEIIESVLE HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHH GIKEAEKLYDIKGNLILGCMRNMDIPSAFEVVKKGAKFIGKGVVAIDLCAGEEPHFPGKY HHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH IEVLKLAKEYGYRITIHAGEAGVGENVLEAINLLNAERIGHGIYIKDCAEAYKLVKEKNI HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCC PLEMCPTSNLHTKASESYEAHPFMDFLKDGIKVTINTDNMTVSNTTITKELEMLNKFCGL CEEECCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCEEECCCHHHHHHHHHHHHHCC SIEDYKILYLNAVEASFASSETKEVLKSYVKEITA CCCCEEEEEEEEHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA