| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755956
Identifier: 170755956
GI number: 170755956
Start: 1548608
End: 1549099
Strand: Reverse
Name: 170755956
Synonym: CLD_3153
Alternate gene names: NA
Gene position: 1549099-1548608 (Counterclockwise)
Preceding gene: 170756947
Following gene: 170756452
Centisome position: 39.14
GC content: 26.22
Gene sequence:
>492_bases ATGAAAAAAAATTATAACATGAAAAAAACCATAGCTATGAAAGGCTTTATTTCTGAATTTGGAGAAATTTTTTCTGAAAA AATGAAAAAAAGATTATTAGAATTAGAAATAAGAACTGTACTCACTCGAAAGGAACATAGAAATAAATTAGATATAAAAC ATGTAGAACATACAAAATATCCTTGTGAAGATTTAGATAGCAAAAATCTAGAAAAAGAATATACTTATGGTCAATTTGTA ATTACAGAGGGCAATCTATATTTTAGTGATACTTGTGTAGAAAATGAAAAAGTTATGCAATCACCTATAGTAAATACAAT ATATAATTCTCTTGATGATGAAGATATGCTTATTGATGAAGATACAACTGCTAAAAAAATAGATGATACCAATATTGATT ACGTAGTAGATACCTTATTAACAGCCTGTCCTGAAGTCTCCCAAAGATATTTAAAAATTGTGCGCGAAATGTTATCTAAC GAAAAAAGATAA
Upstream 100 bases:
>100_bases ATTAAGGTGGTTTTTATATTATATAAAATTTTTATTAAACTTTTATAAAGCTTACCAAATCCTTGCTTAAAAATAGTTTA GTATAAGGAGAGTAGTTTTA
Downstream 100 bases:
>100_bases TTTTCATATTTAAAAACAAGAGCATATATTATAACATATATATGTCTTTATATGGATAAAACTTTTAAATAGTTTTTTCT AATATATGCTCTTTATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFV ITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSN EKR
Sequences:
>Translated_163_residues MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFV ITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSN EKR >Mature_163_residues MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFV ITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSN EKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19250; Mature: 19250
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC PCEDLDSKNLEKEYTYGQFVITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDE CCCCCCCCCCCCCCCCCEEEEECCCEEECCCHHCHHHHHHHHHHHHHHHCCCCCCEEECC DTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSNEKR CCCHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKEHRNKLDIKHVEHTKY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC PCEDLDSKNLEKEYTYGQFVITEGNLYFSDTCVENEKVMQSPIVNTIYNSLDDEDMLIDE CCCCCCCCCCCCCCCCCEEEEECCCEEECCCHHCHHHHHHHHHHHHHHHCCCCCCEEECC DTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSNEKR CCCHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA