| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755861
Identifier: 170755861
GI number: 170755861
Start: 1014372
End: 1014749
Strand: Reverse
Name: 170755861
Synonym: CLD_3662
Alternate gene names: NA
Gene position: 1014749-1014372 (Counterclockwise)
Preceding gene: 170756701
Following gene: 170754251
Centisome position: 25.64
GC content: 28.84
Gene sequence:
>378_bases ATGGATAACTCAAGAGAAGAAATTGTAATGGATGGACTTGTACCATCATCTATATATTTAACAATAAGACTTGTTTATAA TAAATTAATTGATATGATCGATATCCGTCATAAGCTAAATAAATACCTATTTCAATTTGGTGGACATATTGGATATAGCG TAAGGAAATCTGAACGAAGGAAAGGATCTGCAAAAGAAATGCTTAATTTAGCTTTAGAAAAATGCAAAGATATGAATATG GAAAAAGCACTAATTACTTGTAGCAAAGAAAATATTGCATCAGCAAAAGCTATTATCTATAATGGCGGTGTTCTTGAAAA TGTTGCCCGTATATCTTTAATTGATTTTAATGCTTCATCAGAACCAATTATAATTTAA
Upstream 100 bases:
>100_bases CTTAGATTATAAAAAGGAATTTGAAATAAAAGGTGGAATCATACATGACACTGCTGGATTAGAAAAATCTAAAAATTTTG ATTAGTGGCTTTCTATTGTT
Downstream 100 bases:
>100_bases AGTAGTTCCTACTTATGCTAATTCTAAATTTGTTTGATAATACTTAAATCTCAAACTGCATCTTTCATTTAGTACCTTTT CATAACATTCTACTGAATAA
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; Acetyltransferase Family Protein; Acetyltransferase Of; Acetyl Transferase; Acetyltransferase GNAT Family Protein; GCN5-Like N-Acetyltransferase; Acetyltransferase Gnat Family Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MDNSREEIVMDGLVPSSIYLTIRLVYNKLIDMIDIRHKLNKYLFQFGGHIGYSVRKSERRKGSAKEMLNLALEKCKDMNM EKALITCSKENIASAKAIIYNGGVLENVARISLIDFNASSEPIII
Sequences:
>Translated_125_residues MDNSREEIVMDGLVPSSIYLTIRLVYNKLIDMIDIRHKLNKYLFQFGGHIGYSVRKSERRKGSAKEMLNLALEKCKDMNM EKALITCSKENIASAKAIIYNGGVLENVARISLIDFNASSEPIII >Mature_125_residues MDNSREEIVMDGLVPSSIYLTIRLVYNKLIDMIDIRHKLNKYLFQFGGHIGYSVRKSERRKGSAKEMLNLALEKCKDMNM EKALITCSKENIASAKAIIYNGGVLENVARISLIDFNASSEPIII
Specific function: Unknown
COG id: COG3981
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14140; Mature: 14140
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSREEIVMDGLVPSSIYLTIRLVYNKLIDMIDIRHKLNKYLFQFGGHIGYSVRKSERR CCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC KGSAKEMLNLALEKCKDMNMEKALITCSKENIASAKAIIYNGGVLENVARISLIDFNASS CCCHHHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHEEEECCCHHHHHHEEEEEECCCCC EPIII CCEEC >Mature Secondary Structure MDNSREEIVMDGLVPSSIYLTIRLVYNKLIDMIDIRHKLNKYLFQFGGHIGYSVRKSERR CCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC KGSAKEMLNLALEKCKDMNMEKALITCSKENIASAKAIIYNGGVLENVARISLIDFNASS CCCHHHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHEEEECCCHHHHHHEEEEEECCCCC EPIII CCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA