| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755630
Identifier: 170755630
GI number: 170755630
Start: 977252
End: 977719
Strand: Reverse
Name: 170755630
Synonym: CLD_3701
Alternate gene names: NA
Gene position: 977719-977252 (Counterclockwise)
Preceding gene: 170756408
Following gene: 170755360
Centisome position: 24.7
GC content: 24.57
Gene sequence:
>468_bases GTGCATATAATGTATATATTTTTTTCATTTTTGACAGGAGTATTAATTGTTACAAGTATGATATTAAATGGAGAATTATC TAAGCGAATAGGTACTATAAATAGTGTAGTTATAAACTATTTAACTGCTACATTAGCCTCTATTATTTTTTATTATATTA CATTAAATTTTATATCAAATACTCCTACTATAGCTAATACTTCTTTAGTTTATTTTCTAGGTGGAGTTATAGGTGTTTTA ACTACTTATATATTCAATGTAATAGTTCATAAAATACCAACAGTGTATACAGTTATACTACGTTTTATAGGTCAAATGCT TACAAGTGCAATTATAGACTATTTATACTTCAATATTTTTTCTATAGGAAAGGTAGTAGGATGTGTACTATTTTTAATAG GTATTATACTTAATGCAAAATCTGATGAAAACTATAAGCGAAAGCAACTTACATCACTTAGTAATTAA
Upstream 100 bases:
>100_bases GGATTATTTGGTGTTCAAGTTAACAAAATGAGAAAAGAAAAAATACTAAGTTTTTCACTAATCATAACAGGTTTAATTTT TATGATTTTATTATAAAGAG
Downstream 100 bases:
>100_bases ATTATTTATATAAATTTTGGAGGACATATTATGAAATATGAAGTAATATTATTTGATGCAGATGAAGCATTATATGATTT TAAAAAACCTGAAAGAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MHIMYIFFSFLTGVLIVTSMILNGELSKRIGTINSVVINYLTATLASIIFYYITLNFISNTPTIANTSLVYFLGGVIGVL TTYIFNVIVHKIPTVYTVILRFIGQMLTSAIIDYLYFNIFSIGKVVGCVLFLIGIILNAKSDENYKRKQLTSLSN
Sequences:
>Translated_155_residues MHIMYIFFSFLTGVLIVTSMILNGELSKRIGTINSVVINYLTATLASIIFYYITLNFISNTPTIANTSLVYFLGGVIGVL TTYIFNVIVHKIPTVYTVILRFIGQMLTSAIIDYLYFNIFSIGKVVGCVLFLIGIILNAKSDENYKRKQLTSLSN >Mature_155_residues MHIMYIFFSFLTGVLIVTSMILNGELSKRIGTINSVVINYLTATLASIIFYYITLNFISNTPTIANTSLVYFLGGVIGVL TTYIFNVIVHKIPTVYTVILRFIGQMLTSAIIDYLYFNIFSIGKVVGCVLFLIGIILNAKSDENYKRKQLTSLSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17344; Mature: 17344
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIMYIFFSFLTGVLIVTSMILNGELSKRIGTINSVVINYLTATLASIIFYYITLNFISN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPTIANTSLVYFLGGVIGVLTTYIFNVIVHKIPTVYTVILRFIGQMLTSAIIDYLYFNIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGKVVGCVLFLIGIILNAKSDENYKRKQLTSLSN HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MHIMYIFFSFLTGVLIVTSMILNGELSKRIGTINSVVINYLTATLASIIFYYITLNFISN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPTIANTSLVYFLGGVIGVLTTYIFNVIVHKIPTVYTVILRFIGQMLTSAIIDYLYFNIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGKVVGCVLFLIGIILNAKSDENYKRKQLTSLSN HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA