| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755593
Identifier: 170755593
GI number: 170755593
Start: 3603834
End: 3604241
Strand: Reverse
Name: 170755593
Synonym: CLD_1197
Alternate gene names: NA
Gene position: 3604241-3603834 (Counterclockwise)
Preceding gene: 170757536
Following gene: 170756799
Centisome position: 91.06
GC content: 31.13
Gene sequence:
>408_bases ATGATTCAAGTTTTTTGTGATCAGAGAGGATCAGGAAAAACAAAGGCTATGATTAATATGGCTAATGAGGAGGTTAAGTT TAGAGAAGGCAATATTGTTTACATCGATGAGGATAATAGTGCTATGTTTCAGCTGAATAGTGAAATAAGGTTGATTGATA GCTCTGAATTTAAAATTAATAGTTGCGAGAGCTTTTATGGATTTTTGTGCGGCATTTTATCAAAGGATTATGATATTGAA AGCGTATATATTGATGGGCTGTTTGATATTGTAACTAAGAGTGTATGTAATGCGGCACAATTATTTTATGCCCTAGAAGA CATTGGAGAACAATATAATGTGAATTTTTTTATAAGTATAAATGAAGAGAAGGATATACCTGAGATTATAAGAAAGTATG TAGCATAA
Upstream 100 bases:
>100_bases TTATTTTTAAAATATTCCTAATATTATTGAAAAACATTTTTAATTACTATATAATTTAAATTAAGGAGTTCACCTAAATA TTATAAAAGGGGTGGTAAAG
Downstream 100 bases:
>100_bases AGATTATTAAAGTTGAAAACAATTTTTAGTTTATATAGATAAAAAATAATTATATATAATAAGTATTAAAGCTATTGATG AGGGGATCTTCAATAGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MIQVFCDQRGSGKTKAMINMANEEVKFREGNIVYIDEDNSAMFQLNSEIRLIDSSEFKINSCESFYGFLCGILSKDYDIE SVYIDGLFDIVTKSVCNAAQLFYALEDIGEQYNVNFFISINEEKDIPEIIRKYVA
Sequences:
>Translated_135_residues MIQVFCDQRGSGKTKAMINMANEEVKFREGNIVYIDEDNSAMFQLNSEIRLIDSSEFKINSCESFYGFLCGILSKDYDIE SVYIDGLFDIVTKSVCNAAQLFYALEDIGEQYNVNFFISINEEKDIPEIIRKYVA >Mature_135_residues MIQVFCDQRGSGKTKAMINMANEEVKFREGNIVYIDEDNSAMFQLNSEIRLIDSSEFKINSCESFYGFLCGILSKDYDIE SVYIDGLFDIVTKSVCNAAQLFYALEDIGEQYNVNFFISINEEKDIPEIIRKYVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15494; Mature: 15494
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVFCDQRGSGKTKAMINMANEEVKFREGNIVYIDEDNSAMFQLNSEIRLIDSSEFKIN CEEEEECCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCEEEEECCEEEEEECCCCEEC SCESFYGFLCGILSKDYDIESVYIDGLFDIVTKSVCNAAQLFYALEDIGEQYNVNFFISI CHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE NEEKDIPEIIRKYVA CCCCCHHHHHHHHCC >Mature Secondary Structure MIQVFCDQRGSGKTKAMINMANEEVKFREGNIVYIDEDNSAMFQLNSEIRLIDSSEFKIN CEEEEECCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCEEEEECCEEEEEECCCCEEC SCESFYGFLCGILSKDYDIESVYIDGLFDIVTKSVCNAAQLFYALEDIGEQYNVNFFISI CHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE NEEKDIPEIIRKYVA CCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA