| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pgi
Identifier: 170755564
GI number: 170755564
Start: 3545017
End: 3546369
Strand: Reverse
Name: pgi
Synonym: CLD_1244
Alternate gene names: 170755564
Gene position: 3546369-3545017 (Counterclockwise)
Preceding gene: 170755000
Following gene: 170756161
Centisome position: 89.59
GC content: 30.16
Gene sequence:
>1353_bases ATGGAAAATTCTTTAAGTCTCGATTTGACAAAAACTAAACCTTATGTTGAGGAGCATGAAATACAATATTTAGAATCAAT AATAAGAGAAATGGATAATACTCTTGGCAAAAAAACAGGTCCAGGAAATAAGTTTCTAGGTTGGATGGATTTACCTATAA ATTATAATAAAGAAGAGTTTGCAAGAATAAAAAAGGCAGCAGAAAAAATAAAAAATACTTGTGATGTGTTTATTGTTATA GGCATAGGAGGATCTTATCTAGGATCAAGAGCTGCTATAGAAATGATATCAAATACATTTTATAATAATTTAGATAAAAA CCAAAGAACAGTGCCACAAATATATTTTGCAGGTAATAATATAAGTTCTACTTATATGGCTGATTTATTAGAATTAGTTA AAGATAAAGATATATGTGTAAATGTAATATCTAAATCAGGTACAACTACAGAGCCAGCTATAGCTTTTAGAATATTTAAA GAATTATTAGAAAAGAAGTATGGAAAAGAAGGAGCAAAAGAAAGAATATTTGCGACTACAGATGCAGCTAAAGGTGCTTT AAGAACTTTAGCTGATTTAGAAGGCTATGAAACTTTTGTAATACCAGATGATGTAGGTGGAAGATTTTCAGTTCTAACTC CAGTAGGATTATTACCTATAGCTGTATCTGGAATAGATGTAGATGAAATTATGAAAGGTGCAGCAGATGCTAGACAAGAA TATTCTTCAGATAATATAGAAAAAAATCATGTGTATAGATATGTAGCAGTAAGAAATGCTTTGTATAGAAAAGGAAAGAC CACAGAAATGTTAGTTAATTTTGAACCATGTCTACATTATTTTGGAGAATGGTGGAAACAACTATATGGAGAAAGTGAAG GTAAAGATGGAAAGGGAATATTCCCAGCAGCAGCAGACTTTTCAACAGATTTACATTCCATGGGACAATATATACAAGAA GGTTTAAGAAATATATTTGAAACATTTATAAATGTAGAAAATCCTAGAAAGTCAATTATAATAAAAGAAGATAAAGAGAA TTTAGATGGACTTAACTTTTTAGCAGAGAAAGACATGGATTATGTAAATCATCAAGCGTTAAGAGGTACTGTTTTAGCAC ACAATGATGGTGGTGTTCCAGCTATAGTATTAAATGTTCCAGAACTTTCAGCTTATTATTTTGGACAATTAGTATATTTC TTTGAAAAAGCTTGTGGAATAAGTGGATATTTACAAGGAGTTAATCCCTTTGATCAACCAGGAGTAGAAGCATATAAAAA GAATATGTTTGCTCTTTTAGGAAAACCAGGCTATGAAGATATGAAAGCTACATTAGAAGAAAGATTGAAGTAA
Upstream 100 bases:
>100_bases GAGGATTCAGAAGATAATAGAATAATGAAAAAATGGCTGTTGAATTACTTCAACAGCTTTTTATATTAAAATGTAAATAA TTACATTGGAGGTATTAAAC
Downstream 100 bases:
>100_bases TAGAATTTTTATGAGAATATTAGTAGATGCAGATGCTTGCCCAGGAAGAAATATAATAGAACAAGTAGCTAAAAAATATA AAATAGATGTTATGATGTTT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MENSLSLDLTKTKPYVEEHEIQYLESIIREMDNTLGKKTGPGNKFLGWMDLPINYNKEEFARIKKAAEKIKNTCDVFIVI GIGGSYLGSRAAIEMISNTFYNNLDKNQRTVPQIYFAGNNISSTYMADLLELVKDKDICVNVISKSGTTTEPAIAFRIFK ELLEKKYGKEGAKERIFATTDAAKGALRTLADLEGYETFVIPDDVGGRFSVLTPVGLLPIAVSGIDVDEIMKGAADARQE YSSDNIEKNHVYRYVAVRNALYRKGKTTEMLVNFEPCLHYFGEWWKQLYGESEGKDGKGIFPAAADFSTDLHSMGQYIQE GLRNIFETFINVENPRKSIIIKEDKENLDGLNFLAEKDMDYVNHQALRGTVLAHNDGGVPAIVLNVPELSAYYFGQLVYF FEKACGISGYLQGVNPFDQPGVEAYKKNMFALLGKPGYEDMKATLEERLK
Sequences:
>Translated_450_residues MENSLSLDLTKTKPYVEEHEIQYLESIIREMDNTLGKKTGPGNKFLGWMDLPINYNKEEFARIKKAAEKIKNTCDVFIVI GIGGSYLGSRAAIEMISNTFYNNLDKNQRTVPQIYFAGNNISSTYMADLLELVKDKDICVNVISKSGTTTEPAIAFRIFK ELLEKKYGKEGAKERIFATTDAAKGALRTLADLEGYETFVIPDDVGGRFSVLTPVGLLPIAVSGIDVDEIMKGAADARQE YSSDNIEKNHVYRYVAVRNALYRKGKTTEMLVNFEPCLHYFGEWWKQLYGESEGKDGKGIFPAAADFSTDLHSMGQYIQE GLRNIFETFINVENPRKSIIIKEDKENLDGLNFLAEKDMDYVNHQALRGTVLAHNDGGVPAIVLNVPELSAYYFGQLVYF FEKACGISGYLQGVNPFDQPGVEAYKKNMFALLGKPGYEDMKATLEERLK >Mature_450_residues MENSLSLDLTKTKPYVEEHEIQYLESIIREMDNTLGKKTGPGNKFLGWMDLPINYNKEEFARIKKAAEKIKNTCDVFIVI GIGGSYLGSRAAIEMISNTFYNNLDKNQRTVPQIYFAGNNISSTYMADLLELVKDKDICVNVISKSGTTTEPAIAFRIFK ELLEKKYGKEGAKERIFATTDAAKGALRTLADLEGYETFVIPDDVGGRFSVLTPVGLLPIAVSGIDVDEIMKGAADARQE YSSDNIEKNHVYRYVAVRNALYRKGKTTEMLVNFEPCLHYFGEWWKQLYGESEGKDGKGIFPAAADFSTDLHSMGQYIQE GLRNIFETFINVENPRKSIIIKEDKENLDGLNFLAEKDMDYVNHQALRGTVLAHNDGGVPAIVLNVPELSAYYFGQLVYF FEKACGISGYLQGVNPFDQPGVEAYKKNMFALLGKPGYEDMKATLEERLK
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Caenorhabditis elegans, GI71996708, Length=396, Percent_Identity=25, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71996703, Length=396, Percent_Identity=25, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319673, Length=383, Percent_Identity=25.8485639686684, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 50522; Mature: 50522
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENSLSLDLTKTKPYVEEHEIQYLESIIREMDNTLGKKTGPGNKFLGWMDLPINYNKEEF CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHH ARIKKAAEKIKNTCDVFIVIGIGGSYLGSRAAIEMISNTFYNNLDKNQRTVPQIYFAGNN HHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC ISSTYMADLLELVKDKDICVNVISKSGTTTEPAIAFRIFKELLEKKYGKEGAKERIFATT CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCEEEEC DAAKGALRTLADLEGYETFVIPDDVGGRFSVLTPVGLLPIAVSGIDVDEIMKGAADARQE HHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCHHHHEECCCCHHHHHHHHHHHHHH YSSDNIEKNHVYRYVAVRNALYRKGKTTEMLVNFEPCLHYFGEWWKQLYGESEGKDGKGI HCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC FPAAADFSTDLHSMGQYIQEGLRNIFETFINVENPRKSIIIKEDKENLDGLNFLAEKDMD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCHH YVNHQALRGTVLAHNDGGVPAIVLNVPELSAYYFGQLVYFFEKACGISGYLQGVNPFDQP HHHHHHHHCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCC GVEAYKKNMFALLGKPGYEDMKATLEERLK CHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MENSLSLDLTKTKPYVEEHEIQYLESIIREMDNTLGKKTGPGNKFLGWMDLPINYNKEEF CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHH ARIKKAAEKIKNTCDVFIVIGIGGSYLGSRAAIEMISNTFYNNLDKNQRTVPQIYFAGNN HHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC ISSTYMADLLELVKDKDICVNVISKSGTTTEPAIAFRIFKELLEKKYGKEGAKERIFATT CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHCEEEEC DAAKGALRTLADLEGYETFVIPDDVGGRFSVLTPVGLLPIAVSGIDVDEIMKGAADARQE HHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCHHHHEECCCCHHHHHHHHHHHHHH YSSDNIEKNHVYRYVAVRNALYRKGKTTEMLVNFEPCLHYFGEWWKQLYGESEGKDGKGI HCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC FPAAADFSTDLHSMGQYIQEGLRNIFETFINVENPRKSIIIKEDKENLDGLNFLAEKDMD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHCHH YVNHQALRGTVLAHNDGGVPAIVLNVPELSAYYFGQLVYFFEKACGISGYLQGVNPFDQP HHHHHHHHCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCC GVEAYKKNMFALLGKPGYEDMKATLEERLK CHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA