| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is sepP [H]
Identifier: 170755166
GI number: 170755166
Start: 3719628
End: 3720188
Strand: Reverse
Name: sepP [H]
Synonym: CLD_1099
Alternate gene names: 170755166
Gene position: 3720188-3719628 (Counterclockwise)
Preceding gene: 170757691
Following gene: 170754346
Centisome position: 93.99
GC content: 25.67
Gene sequence:
>561_bases ATGTTATTGATACAGAATATTGATAATTGTATTCTATATGTTATTAAGAAATATGTACAAAATAAATATTTAGATATATT GATGCCTAGAATAACAAAAATGGGTGAACTAGGAATCATTTGGATTGCAATAGCTCTTGTTTTAATATTAAACACACTAT ATAGAATAATAGGGATGGTAGTAATACTAACATTAATTATAAGTACAATTATTGGAGAAGGAATAATAAAACATATTGTA AGACGAATTAGGCCATGTAATCAGCAGAATAGTTTCAATATGCTGATTTTAAAACCAATGTCTTATTCTTTTCCTTCAGG ACATACTTTATCTTCCTTTGCTGTTGCAGAGGTTCTATCTGTGTATTTTGCTCAATATAAGTTGATACTTATGACAATAG CATTTTTAATAGCTTTATCCAGAATATATTTATATGTTCATTATCCAACGGATGTTATAGCAGGAATTATACTTGGTATA TTATGCTCAAAATTAATTTTTATAATTTTACAAGAAGGATACATGGGAAAAATTACTGTTTTTTATCAAAATATATTATA G
Upstream 100 bases:
>100_bases CATTTTTCATATATATTGGTTGCTATTGTAATAATATCCATTATTCCGGGAGTGGTTGTGTTTATTAGGGAAAAGAGAAA TGGAGGTAAGAAAGAATAAG
Downstream 100 bases:
>100_bases GAAGGATAGTTCAATATGAATATGGAATTTTTTCGATTAATAAATAATTTAGCAAATAAAAATAGTGTTTTAGATAAGAT AATAATTTTTTTCTCAAAGG
Product: undecaprenyl-diphosphatase
Products: NA
Alternate protein names: Dolicholpyrophosphatase [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMVVILTLIISTIIGEGIIKHIV RRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLSVYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGI LCSKLIFIILQEGYMGKITVFYQNIL
Sequences:
>Translated_186_residues MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMVVILTLIISTIIGEGIIKHIV RRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLSVYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGI LCSKLIFIILQEGYMGKITVFYQNIL >Mature_186_residues MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMVVILTLIISTIIGEGIIKHIV RRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLSVYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGI LCSKLIFIILQEGYMGKITVFYQNIL
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: =3.6.1.27 [H]
Molecular weight: Translated: 21235; Mature: 21235
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMV CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VILTLIISTIIGEGIIKHIVRRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH VYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGILCSKLIFIILQEGYMGKITV HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FYQNIL HHHHCC >Mature Secondary Structure MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMV CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VILTLIISTIIGEGIIKHIVRRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH VYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGILCSKLIFIILQEGYMGKITV HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FYQNIL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1321720 [H]