| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755124
Identifier: 170755124
GI number: 170755124
Start: 978991
End: 979413
Strand: Reverse
Name: 170755124
Synonym: CLD_3697
Alternate gene names: NA
Gene position: 979413-978991 (Counterclockwise)
Preceding gene: 170757689
Following gene: 170756408
Centisome position: 24.74
GC content: 26.24
Gene sequence:
>423_bases ATGAATTTTTCACAAGAATTTAATAGGATTATGCTATCTCAAAAGGAGTTAGCTTTAGCAACAAGTGTAGATAATATTCC AAATGTTCGAATTGTTAATTTTTACTACAATATTTCAAATAAAGGAGTAGTATACTTTTCAACATTCTCAGATAATCCAA AAATTGAAGAGTTTGCTAAAAACAAAATAGTGGCATTTACCACTATCCCATCTAATGGAAATGAACATGTTAGAGTTAAT AAGGCACTAATTCAAAAAAGCAATTTAACAATATTTGATTTAAAAAATGATTTTATCAAGAAAATTCCTGATTATGAAAT CACAATAAATGAGGTTGGAAATCAATTATCTCTTTATGAAATTCACTTTAACCAAGCTACTGTTACATTAGATTACACTC AAAGTGATATCATAACTTTATAG
Upstream 100 bases:
>100_bases GTATACATTTATTTTATAATCTTGACATAGTGGTGTCAAATTTACTGTGATATATTTAATCTGTTAGAAATAATATACCT AATATATAGGAGGATTACAA
Downstream 100 bases:
>100_bases TATAATAATGAATAATCCAAAGATAGTTAAGATATCTTTGGATTATTTAATATTACTTATAAAAGCCCTATTTTTCACCA TTACTTCTGATACGGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNFSQEFNRIMLSQKELALATSVDNIPNVRIVNFYYNISNKGVVYFSTFSDNPKIEEFAKNKIVAFTTIPSNGNEHVRVN KALIQKSNLTIFDLKNDFIKKIPDYEITINEVGNQLSLYEIHFNQATVTLDYTQSDIITL
Sequences:
>Translated_140_residues MNFSQEFNRIMLSQKELALATSVDNIPNVRIVNFYYNISNKGVVYFSTFSDNPKIEEFAKNKIVAFTTIPSNGNEHVRVN KALIQKSNLTIFDLKNDFIKKIPDYEITINEVGNQLSLYEIHFNQATVTLDYTQSDIITL >Mature_140_residues MNFSQEFNRIMLSQKELALATSVDNIPNVRIVNFYYNISNKGVVYFSTFSDNPKIEEFAKNKIVAFTTIPSNGNEHVRVN KALIQKSNLTIFDLKNDFIKKIPDYEITINEVGNQLSLYEIHFNQATVTLDYTQSDIITL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16104; Mature: 16104
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSQEFNRIMLSQKELALATSVDNIPNVRIVNFYYNISNKGVVYFSTFSDNPKIEEFAK CCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHHHC NKIVAFTTIPSNGNEHVRVNKALIQKSNLTIFDLKNDFIKKIPDYEITINEVGNQLSLYE CCEEEEEECCCCCCCEEEEEHHHEEECCEEEEECCCHHHHHCCCCEEEEECCCCEEEEEE IHFNQATVTLDYTQSDIITL EEECCEEEEEEECCCCEEEC >Mature Secondary Structure MNFSQEFNRIMLSQKELALATSVDNIPNVRIVNFYYNISNKGVVYFSTFSDNPKIEEFAK CCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCHHHHHC NKIVAFTTIPSNGNEHVRVNKALIQKSNLTIFDLKNDFIKKIPDYEITINEVGNQLSLYE CCEEEEEECCCCCCCEEEEEHHHEEECCEEEEECCCHHHHHCCCCEEEEECCCCEEEEEE IHFNQATVTLDYTQSDIITL EEECCEEEEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA