Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is celA [H]
Identifier: 170755048
GI number: 170755048
Start: 3649685
End: 3649993
Strand: Reverse
Name: celA [H]
Synonym: CLD_1163
Alternate gene names: 170755048
Gene position: 3649993-3649685 (Counterclockwise)
Preceding gene: 170756502
Following gene: 170755857
Centisome position: 92.21
GC content: 27.51
Gene sequence:
>309_bases ATGAAAAATATTTTATTAGTATGTTGTGCAGGAATGTCTACTAGCTTACTGGTAACAAAAATGAATGCAGTAGCTATAAA AAATGGGATAGATGTTAAAATAAATGCTGTTCCAGAAGCAGAATTAAAAAAGTACATTGATGATGTAGATGTAATTTTAC TTGGACCTCAAGTAAGATATTTGTTGAATCAAGTAAGAGATCAAGTAAAGACAAAAGGAATAAATGTAGATGTTATAAAT AGCATAGACTACGGGACTATGAATGGTGAAAAAGTTTTAAATTTTGCATTAGATTTAATTAATAAATAG
Upstream 100 bases:
>100_bases TGTTGCAAACACTTAATTACATTGGATATATAGTTGGCATGCAATTTGCTTTAAATATAATATAGTAATAATTATGAGAG TGTTTAAAGGGGGACTTTAA
Downstream 100 bases:
>100_bases TAGAATTTGGGCTATTTTACAAGAAAATAAGTAATCTTAAATTATTTTATATTGTTGCTATTAAATATCCTTTCAAAGAT ATTTAATAACTAGAAGGAAA
Product: PTS system lactose/cellobiose-specific family IIB subunit
Products: NA
Alternate protein names: EIIB-Cel; PTS system cellobiose-specific EIIB component [H]
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKNILLVCCAGMSTSLLVTKMNAVAIKNGIDVKINAVPEAELKKYIDDVDVILLGPQVRYLLNQVRDQVKTKGINVDVIN SIDYGTMNGEKVLNFALDLINK
Sequences:
>Translated_102_residues MKNILLVCCAGMSTSLLVTKMNAVAIKNGIDVKINAVPEAELKKYIDDVDVILLGPQVRYLLNQVRDQVKTKGINVDVIN SIDYGTMNGEKVLNFALDLINK >Mature_102_residues MKNILLVCCAGMSTSLLVTKMNAVAIKNGIDVKINAVPEAELKKYIDDVDVILLGPQVRYLLNQVRDQVKTKGINVDVIN SIDYGTMNGEKVLNFALDLINK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=92, Percent_Identity=45.6521739130435, Blast_Score=74, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 11220; Mature: 11220
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILLVCCAGMSTSLLVTKMNAVAIKNGIDVKINAVPEAELKKYIDDVDVILLGPQVRY CCCEEEEEECCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHHHCCCCEEEECCHHHH LLNQVRDQVKTKGINVDVINSIDYGTMNGEKVLNFALDLINK HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKNILLVCCAGMSTSLLVTKMNAVAIKNGIDVKINAVPEAELKKYIDDVDVILLGPQVRY CCCEEEEEECCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHHHCCCCEEEECCHHHH LLNQVRDQVKTKGINVDVINSIDYGTMNGEKVLNFALDLINK HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]