| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755000
Identifier: 170755000
GI number: 170755000
Start: 3546453
End: 3546623
Strand: Reverse
Name: 170755000
Synonym: CLD_1243
Alternate gene names: NA
Gene position: 3546623-3546453 (Counterclockwise)
Preceding gene: 170757186
Following gene: 170755564
Centisome position: 89.6
GC content: 35.67
Gene sequence:
>171_bases ATGGCAGATAAGACGCTAACATGTAAAGATTGTGGAAAGGAATTCGTTTTCACTGAAGGAGAACAAGAATTCTATAAAGA AAAGGGATTCGAAAACGAACCACAAAGATGCCCAGAATGTAGAAGAGCAAGAAAACAAGAAAGAAACAACAATAGAGGAT TCAGAAGATAA
Upstream 100 bases:
>100_bases AGATTTAAACTGGTAATATAAAGAAGTATATCCCCTTGAATTTGGGAAGTATGTTCTTTTTCACTGGTTGTAAATCCCAA ATAAAGGAGGATGTCATACA
Downstream 100 bases:
>100_bases TAGAATAATGAAAAAATGGCTGTTGAATTACTTCAACAGCTTTTTATATTAAAATGTAAATAATTACATTGGAGGTATTA AACATGGAAAATTCTTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MADKTLTCKDCGKEFVFTEGEQEFYKEKGFENEPQRCPECRRARKQERNNNRGFRR
Sequences:
>Translated_56_residues MADKTLTCKDCGKEFVFTEGEQEFYKEKGFENEPQRCPECRRARKQERNNNRGFRR >Mature_55_residues ADKTLTCKDCGKEFVFTEGEQEFYKEKGFENEPQRCPECRRARKQERNNNRGFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6793; Mature: 6661
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKTLTCKDCGKEFVFTEGEQEFYKEKGFENEPQRCPECRRARKQERNNNRGFRR CCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADKTLTCKDCGKEFVFTEGEQEFYKEKGFENEPQRCPECRRARKQERNNNRGFRR CCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA