| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754809
Identifier: 170754809
GI number: 170754809
Start: 1127490
End: 1128068
Strand: Reverse
Name: 170754809
Synonym: CLD_3551
Alternate gene names: NA
Gene position: 1128068-1127490 (Counterclockwise)
Preceding gene: 170754606
Following gene: 170757216
Centisome position: 28.5
GC content: 26.08
Gene sequence:
>579_bases ATGAAAATTGATTTAACATTAGAAATTAAAAAAGAATTACTTTCTTCAACTCTAAAAAAAGCAATAAATGAAGATAAAGC ATTTGGTTCTATAGGCCATTTAGGAACTCATTTTGATGTTATGGATAAAGAATTTCCTCTTGATTATATAAAAACAAGAG GGAAAATATTTAATGTATGCCACATAAGAAATAATGAGATTTCTTTAAATGATATAAACTTAAATGAAATTGAAGAAAAT GACTTTATTATTTTTTATACTGGATACTTAAAAGAAACAGGCTATGGAACAGGTGAATACTTAAAAGATCATCCTGAGCT TTCTAGAGAATTAATTGACTATCTAATAAATAAAAAAATTAGCATGATAGGTATAGATACGACTGGAATAAAAAAAAGTT CTGAACATAGACATATAGATCAGTATTGTGCAGATAGGAATGTGTTTATCATTGAAAATATGAATAATCTTGATCTATTA TGGGCAGAAGCTAAAAATAATTCTTTCATCATGTATACTTTTCCTCTTAATATAAAAGGTGTAACAGGGCTTACATCTAG AGTTATAGCTGAACTATAA
Upstream 100 bases:
>100_bases TTTATTCAATTATATCTAAATAGTTTACAAGGAAACTATTTTGTGATACCATTAAGTAGTTTCCTAGGAAACTAATTTGA ATTTAATGGAGGTTTTAAAA
Downstream 100 bases:
>100_bases AAACATATACCGCTTTATAAATAATTTTGTACGAACTAAATATTTTATTTATTCATAATTGGACTAGGTAGCAAACTTAA CAGCTTGCTACCTAATTAAT
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase; Polyketide Cyclase
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEEN DFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLL WAEAKNNSFIMYTFPLNIKGVTGLTSRVIAEL
Sequences:
>Translated_192_residues MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEEN DFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLL WAEAKNNSFIMYTFPLNIKGVTGLTSRVIAEL >Mature_192_residues MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEEN DFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLL WAEAKNNSFIMYTFPLNIKGVTGLTSRVIAEL
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22113; Mature: 22113
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVC CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHCCCCEEEEE HIRNNEISLNDINLNEIEENDFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKI EEECCEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCE SMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLLWAEAKNNSFIMYTFPLNIKG EEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEEECC VTGLTSRVIAEL CCCHHHHHHHCC >Mature Secondary Structure MKIDLTLEIKKELLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEFPLDYIKTRGKIFNVC CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHCCCCEEEEE HIRNNEISLNDINLNEIEENDFIIFYTGYLKETGYGTGEYLKDHPELSRELIDYLINKKI EEECCEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHCCCE SMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLLWAEAKNNSFIMYTFPLNIKG EEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECEEECC VTGLTSRVIAEL CCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA