The gene/protein map for NC_010516 is currently unavailable.
Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170754626

Identifier: 170754626

GI number: 170754626

Start: 1311252

End: 1311377

Strand: Reverse

Name: 170754626

Synonym: CLD_3383

Alternate gene names: NA

Gene position: 1311377-1311252 (Counterclockwise)

Preceding gene: 170755927

Following gene: 170754853

Centisome position: 33.13

GC content: 24.6

Gene sequence:

>126_bases
ATGGGAACCAAATCTTTTATAATTACCTATGGTTTACCTGTAAACAGTGAATCCAATGTATTTGATCCCAATAAATTATT
ATTAGTAGTATTTAATTCAGTAACTATTAGTGATTTAGTTATATAA

Upstream 100 bases:

>100_bases
TAAAAAACAATTTTTTTATTAATGCGTTAATAAACATTATTTTTAATGTTAGAAAAGAGTTAATAATAATTTATTGTTCG
ACTTTTAAAAAAGCAAAATA

Downstream 100 bases:

>100_bases
CCAAGATCCAAGGCTAAAACTTCTCATGAATTAATTTTATATTTTGAGGATAGAGCCTTCTTACTCTTTGGAAATACTGT
CCAATAATCACATATAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 40

Protein sequence:

>41_residues
MGTKSFIITYGLPVNSESNVFDPNKLLLVVFNSVTISDLVI

Sequences:

>Translated_41_residues
MGTKSFIITYGLPVNSESNVFDPNKLLLVVFNSVTISDLVI
>Mature_40_residues
GTKSFIITYGLPVNSESNVFDPNKLLLVVFNSVTISDLVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4486; Mature: 4355

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKSFIITYGLPVNSESNVFDPNKLLLVVFNSVTISDLVI
CCCCCEEEEECCCCCCCCCEECCCEEEEEEECCCEEEEEEC
>Mature Secondary Structure 
GTKSFIITYGLPVNSESNVFDPNKLLLVVFNSVTISDLVI
CCCCEEEEECCCCCCCCCEECCCEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA