| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754509
Identifier: 170754509
GI number: 170754509
Start: 429293
End: 429883
Strand: Direct
Name: 170754509
Synonym: CLD_0405
Alternate gene names: NA
Gene position: 429293-429883 (Clockwise)
Preceding gene: 170757136
Following gene: 170756879
Centisome position: 10.85
GC content: 23.18
Gene sequence:
>591_bases ATGAGTAGAAATTTAGTGACGAAGTATATGAATGTTATAAATGCTATGGAAAATAAAAAATATTTATATTCCTTACTTTT GTATTTAATTGCTCCAACCTTAGACGGAGTAAAACCATCCACTATTGTTACTTTAAGTACAAGTGGTAAAAATTTAGATT TATTATGGAGTAAATATAAAAAGGAGTTTCTAGATATTTATAAAATTAATTATATAGAATTGAAGAAAACAGATAAATGT ACAACTATTTTGTTTTATCATAAAGAAGCATTAAATAAGGTACTATACAATAAATATAATTTAGAATTTTTAGAAGAAAC AGGATATAGAGATTTTTCTAATGAAGAATCATTTTTATTAAAATTAAAAAGCAGATTTAAAGATACTTGCCCTCACGAAA TAGGTATTTTTTTAGGTATACCTATAGAGGAAGTAAAATCTTTTATAGAAGATCCCAAAAGAGAATGTATATATTGTGGT TATTGGAAAGTTTATAACAATATACAAAAGGCTAAAAAGCAATTTACAACTTATGATATAAGCAGGACTAATATGATTTT AGAAGTATTAGAAAAAGAATTAAATGTATAA
Upstream 100 bases:
>100_bases TCGAGAAAACATTAAAGGATACTATAGAGGAAAATTAATGTTAATAGTGCGTGTTATTAAATTAAGGAAAAAGGGATTAA TACATTAAAAGGAGTTAAAT
Downstream 100 bases:
>100_bases TTAATATTAAATTATTTTTAGCCATGGACAGTATAGATGGGAAGAGTAAAGGATATAGAAATAGATTTACATAAGATATA TGATAAATTAGAAATAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKC TTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLLKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCG YWKVYNNIQKAKKQFTTYDISRTNMILEVLEKELNV
Sequences:
>Translated_196_residues MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKC TTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLLKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCG YWKVYNNIQKAKKQFTTYDISRTNMILEVLEKELNV >Mature_195_residues SRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKCT TILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLLKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGY WKVYNNIQKAKKQFTTYDISRTNMILEVLEKELNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23245; Mature: 23114
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH KEFLDIYKINYIELKKTDKCTTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLL HHHHHHHHCCEEEEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHH KLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGYWKVYNNIQKAKKQFTTYDI HHHHHHHHCCCCCCCEEECCCHHHHHHHHHCHHHCEEEEHHHHHHHHHHHHHHHHHHHCC SRTNMILEVLEKELNV HHHHHHHHHHHHHHCC >Mature Secondary Structure SRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTLSTSGKNLDLLWSKYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHH KEFLDIYKINYIELKKTDKCTTILFYHKEALNKVLYNKYNLEFLEETGYRDFSNEESFLL HHHHHHHHCCEEEEECCCCEEEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHH KLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGYWKVYNNIQKAKKQFTTYDI HHHHHHHHCCCCCCCEEECCCHHHHHHHHHCHHHCEEEEHHHHHHHHHHHHHHHHHHHCC SRTNMILEVLEKELNV HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA