| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754293
Identifier: 170754293
GI number: 170754293
Start: 1102693
End: 1102995
Strand: Reverse
Name: 170754293
Synonym: CLD_3572
Alternate gene names: NA
Gene position: 1102995-1102693 (Counterclockwise)
Preceding gene: 170757313
Following gene: 170756064
Centisome position: 27.87
GC content: 27.39
Gene sequence:
>303_bases ATGGAAAAAAAGCCTTCAGTTAAAAGTTCTGCCAATCTACTTGCAATTGTTTCTTTAATTATGTCTATAATTGTTATTTT ACCAATATTAAATTGGCTTTTTAAAATAACGCCATGGCAAAAATTAGAAGGACTTCCCTTGTTTTTCGGACTATTAATAA GCCCTTTTGGTTTTCTTTTGGGAATATTATCAATAAAAATTCAATCTAATAAATTGGGCAAAATAGGTGTTATTATTAAT ACTTTACTATTCTTACTACCTTTTATCTATATGACTTTAGGGGTTTTAATTTTGGGACCTTAA
Upstream 100 bases:
>100_bases AAATATAATTTTATAAAATATAAAAATAAAATCTGGCTTTTTAACCCATATATAATGTATAATTCAAATATAAATTAATA AATACAAGGAGTATAGTTAT
Downstream 100 bases:
>100_bases TATATAATTAAAACTTAAAACTTTTCTATCTTGACTTTCCAACTCTAATCTATTTTTACATATTATAAGGAAAGTGCCAC GCACTTTCCTTATTTAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MEKKPSVKSSANLLAIVSLIMSIIVILPILNWLFKITPWQKLEGLPLFFGLLISPFGFLLGILSIKIQSNKLGKIGVIIN TLLFLLPFIYMTLGVLILGP
Sequences:
>Translated_100_residues MEKKPSVKSSANLLAIVSLIMSIIVILPILNWLFKITPWQKLEGLPLFFGLLISPFGFLLGILSIKIQSNKLGKIGVIIN TLLFLLPFIYMTLGVLILGP >Mature_100_residues MEKKPSVKSSANLLAIVSLIMSIIVILPILNWLFKITPWQKLEGLPLFFGLLISPFGFLLGILSIKIQSNKLGKIGVIIN TLLFLLPFIYMTLGVLILGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11048; Mature: 11048
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKPSVKSSANLLAIVSLIMSIIVILPILNWLFKITPWQKLEGLPLFFGLLISPFGFLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH GILSIKIQSNKLGKIGVIINTLLFLLPFIYMTLGVLILGP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKKPSVKSSANLLAIVSLIMSIIVILPILNWLFKITPWQKLEGLPLFFGLLISPFGFLL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH GILSIKIQSNKLGKIGVIINTLLFLLPFIYMTLGVLILGP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA