| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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The map label for this gene is cpdB
Identifier: 170726279
GI number:
Start: 2369295
End: 2371358
Strand: Reverse
Name: cpdB
Synonym: Swoo_1926
Alternate gene names: NA
Gene position: NA
Preceding gene: 170726280
Following gene: 170726278
Centisome position: NA
GC content: NA
Gene sequence:
>2064_bases ATGGATATGTTTAATAAAAAAGTTTTAGCGGTAGTGATCGCATCCACACTAGGGTTAGTTGCCTGTGGTTCAGATGATAA CAACGAACAGGTTGCAGCCGTACAGGTTGACCTTAGAATTCTTGAAACCTCAGATCTACACACTAACATCATGGATTATG ACTATTACAAAACAAAGTATGATCCAACCATAGGCTTAGCAAGAACCGCTAGCCTAATCAAACAACAAGGCGCTGAGGTT AACAACTTTGTTTTAGTTGATAATGGTGACCTGCTGCAAGGTAGTCCAATGGGGGATTATGTTGCCGACAATTTCAAACG CGATAACACCATAGGTGGCACACACCCTGCCTATAAAGCGATGAATACCCTAGGCTACTCTGTAGGTAATATTGGTAACC ACGAGTTCAACTACGGGCTAGATTTCTTAGAGGAAGCCCTAGCTGGTGCAAACTTCCCCTATATCAATGCTAACGTATTA TGTGAAGCTGACTGCTGGGAAGGTAAAGCCAAGGGCGATAACCTCTTCACCCCTTACATCATCGAAGAGAAAACCGTCAT CGACAGCAATGGCGATCAACAAACCGTCAAAATTGGTTATATCGGCTTTGTTCCTCCACAAATTCTACTTTGGGATAAAC AAAACCTTTCAGGCAAAGTAACTGTACTTGGGATTGTTGAAGCCGCAGAAAAGTTCATCCCTATGATGAAAGCTGAAGGT GCGGATGTGATTGTTGCCATTCCTCACTCAGGTGTCGGCACGCCATCAAATCCGGTTGATGTTAACGATGAAAATGCCAC CTATGCACTCTCACTGGTTGAGGGGATTGATGCAATCACCTTTGGCCACAGCCACTCAGTTTTTCCATCAGCTACCTTTG AAGGATTGGAAAACGCTGACCTAGAGAAAGGAACAATCAACGGTGTGGCAGCTGTAATGCCTGGTCGTTGGGGTGATAAC TTAGGTATTGTCGATCTTAAACTCGAGATGCAGAACGGCGCTTGGGTTGTCATCGACCGCTCAGCAAAAGCATCACCGAT ATATGACAAAAATGCAGAACAGCCTGAACTCGTCACTGCCGATAATGGTATTCGTGACGCTGTAGCACTTGAGCATCAAG GCACACTTAGCTACGTAGATCAGCCTATTGGTAAAGCCTCTGCTGATATGTATAGCTTCCTGACCTTAGTGCAGGATGAT CCATCAGTGCAGATTGTCTCTGATGCGCAGATAGCTAAAGTCAAAGCTAACCTAACCGACGCATTAAAAGATATTCCGGT GCTTTCTGCGGCTGCTCCATTTAAAGCTGGCGGACGTCACAGCACCGCTGCTGACGCAGACTCTTACGTGCAAGTACCAG CAGGAGATCTGACCTATAAGAATGCCGCCGATCTTTACCTCTATCCAAATACCATGGTTGCCGTTAAGCTTACTGGCGCA GAGCTCAAAGATTGGTTGGAGTGCAGTGCAAACCAGTTTAATCAGATTGATCCAAACATCTCGACACCACAAAACCTAAT TAACTGGGACACGCACCGAACTTACAACTTCGATGTTATCGATGGTGTGACTTACAAAATAGATGTCACTCAACCTACTA AGTTCGATGGGGATTGTAAGCTTGTCAATGAAGATGCAAACCGCATTGTTGACTTGGCTTATACCCAAGATGATACGGTA TTCACCGGTGACGAATTAGCTAAGAAAGAGTTTATCGTCGCAACCAATAACTACCGCGCATTTGGTGGTAAGTTTGCAGG TACAGGAGCGGACTACGTCATCATGGAGTTGCCAGACAGTAATCGTGAGGCACTAGCTCAGTACATCACAGATGAAACAG AGACCAATGGAGAAGTGGATCCTTCTGCTGACAATAACTGGGACTTTGTGACGATCGATACTGCCACTCAATTAGATATC CGCTTTGAAACCCAAGACAGTGAACTTGCTGATAAATTTGTTATCGATAACCAAGTTCGCCCATTAACTAAACGCACAGA TTTAACCGATGAGTTTGGCTTTGCCATCTACAATATTGACCTAACCACACCAGTGACTAAGTAG
Upstream 100 bases:
>100_bases TATATAATCCATCAAGCTGAGTAACGTTAACAGAGAGTAACCATCAGCTAAATGGAAGAGCATAAAAACGCTCTTCTGGG GTCTAAATATAAAGAGAACG
Downstream 100 bases:
>100_bases GTCAACATACTACAAGGCTGTCTCATTTAAGCCTAACCTAGTCGGTTTTGACTAACAGAGACCCTTTTGGCATCAAAAGG GTCTTTTTCTAACCAAACTA
Product: bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>687_residues MDMFNKKVLAVVIASTLGLVACGSDDNNEQVAAVQVDLRILETSDLHTNIMDYDYYKTKYDPTIGLARTASLIKQQGAEV NNFVLVDNGDLLQGSPMGDYVADNFKRDNTIGGTHPAYKAMNTLGYSVGNIGNHEFNYGLDFLEEALAGANFPYINANVL CEADCWEGKAKGDNLFTPYIIEEKTVIDSNGDQQTVKIGYIGFVPPQILLWDKQNLSGKVTVLGIVEAAEKFIPMMKAEG ADVIVAIPHSGVGTPSNPVDVNDENATYALSLVEGIDAITFGHSHSVFPSATFEGLENADLEKGTINGVAAVMPGRWGDN LGIVDLKLEMQNGAWVVIDRSAKASPIYDKNAEQPELVTADNGIRDAVALEHQGTLSYVDQPIGKASADMYSFLTLVQDD PSVQIVSDAQIAKVKANLTDALKDIPVLSAAAPFKAGGRHSTAADADSYVQVPAGDLTYKNAADLYLYPNTMVAVKLTGA ELKDWLECSANQFNQIDPNISTPQNLINWDTHRTYNFDVIDGVTYKIDVTQPTKFDGDCKLVNEDANRIVDLAYTQDDTV FTGDELAKKEFIVATNNYRAFGGKFAGTGADYVIMELPDSNREALAQYITDETETNGEVDPSADNNWDFVTIDTATQLDI RFETQDSELADKFVIDNQVRPLTKRTDLTDEFGFAIYNIDLTTPVTK
Sequences:
NA
Specific function: NA
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA