Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is gltX2
Identifier: 170751931
GI number: 170751931
Start: 5882028
End: 5883368
Strand: Direct
Name: gltX2
Synonym: Mrad2831_5563
Alternate gene names: 170751931
Gene position: 5882028-5883368 (Clockwise)
Preceding gene: 170751929
Following gene: 170751935
Centisome position: 96.78
GC content: 75.54
Gene sequence:
>1341_bases ATGACTCTCGTCCGCTTCGCACCCTCGCCGACCGGGTATCTCCATATCGGCAACGCCCGGCCGGCCCTGCTCAACGCCCT GTTCGCCCGCCGGACCGGCGGCCGCTTCCTGCTCCGCCTCGACGATACCGACGCGGAGCGCTCCACCGAGGCCTTCGCCG AAGCGATCGGCGAGGATCTCGCGTGGCTCGGCATCGTGCCCGACCTGTTCGCCCGGCAGAGCGCCCGCACGGCGCAGCAC GACGCCGCCGCCGACCGCCTGCGCGCAGCGGGCCGGCTCTACCCCTGCTACGAGACCCCGGAGGAGCTGGAGCGCCGCCG CAGGCGCCAGCTCGGGCGCGGCCAACCGCCGATCTACGACCGGGCGGCGCTGCGGCTCACCGGCGACGAGCGGGCGGCGC TCGAGGCCGAGGGCCGCCGGCCGCACTGGCGGTTCCTGCTGGAGGCGCGGACCGTCGGCTGGGACGATCTCGTCCGCGGC CCGGCCCACGTCGACTGCGCGTCCCTGTCGGATCCGGTGCTGATCCGCGCCGACGGCAGCTACCTCTACACGCTGCCGTC GGTGGTGGACGACGCCGATCTCGGCATCACCCACGTGATCCGCGGCGAGGACCACGTCACGAACACCGGCGTGCAGGTGC AGATCTTCGAGGCCCTGGGCGCGGCCGTTCCGGTCTTCGGCCACCACAACCTGCTGACGACCGCCGACGGGGAGGGCCTG TCGAAGCGCCTCGGCCACCTGTCGCTGCGCGGCCTGCGCGAGGCCGGCTACGAGCCCGCGGCGGTGCGCTCGCTGGCGGT GCTGACCGGCTCGGCCGAATCGGTCCGGGCGGTGCCCGACCTCGACACCCTCGCGGGCCTCGTCGATCTCGGGGAGATCT CGCGGGCGCCGGCCCGGTTCGACCCGGCGGAGCTCGACGGCCTCAACGCCCGCCTGATCCACGCCATGCCGTACCGGGAG GCGGCCGCGCGCCTCGCGGATCTCGGGATCCCTGCGGACCGGGCCGAGGCCTTCTGGCTCGCGGTGCGCGCCAACCTGAG CCGGGTTCCGGAGGCGGCGCCGTGGTGGCGGGTCGTGACCGGTCCGGTCGAGCCGGTGCTCACCGAGCCCGCCGTGATCG CGGCCGCCGTCGAGAGCCTGCCCCCCGAGCCGTTCGGCCCGGAGACCTGGAACGCGTGGACGACCGAGATCAGGACTCGC ACCGGCGCCAAGGGCCGCGGCCTGTTCATGCCGCTCCGGCTCGCGCTGACCGGCCTCGAGCACGGGCCGGACCTCGCCGG CCTGCTGCCGCTGATCGGGCGGGAGCGGGCGGCGCGCCGGCTCTCCGGCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases CCGCCTCCTGGGTAGCGGGCCGCCGCGGGTCGGCGCATCGGGCCGGTGTGATCGTGAAGTCCCGCGCACATTCCCGCGGA GATCGGCTAGAGAGCGGGCC
Downstream 100 bases:
>100_bases GCGACCCGGCCCGGACAGCCCCGCCGGCGTTCGTAATCCTAGGCCGTTCGGCGGCGGTTCAGCGGCCGGGTCGCGGGCGC GCCTCGATCAGCGCGGCATC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 2; GluRS 2
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTLVRFAPSPTGYLHIGNARPALLNALFARRTGGRFLLRLDDTDAERSTEAFAEAIGEDLAWLGIVPDLFARQSARTAQH DAAADRLRAAGRLYPCYETPEELERRRRRQLGRGQPPIYDRAALRLTGDERAALEAEGRRPHWRFLLEARTVGWDDLVRG PAHVDCASLSDPVLIRADGSYLYTLPSVVDDADLGITHVIRGEDHVTNTGVQVQIFEALGAAVPVFGHHNLLTTADGEGL SKRLGHLSLRGLREAGYEPAAVRSLAVLTGSAESVRAVPDLDTLAGLVDLGEISRAPARFDPAELDGLNARLIHAMPYRE AAARLADLGIPADRAEAFWLAVRANLSRVPEAAPWWRVVTGPVEPVLTEPAVIAAAVESLPPEPFGPETWNAWTTEIRTR TGAKGRGLFMPLRLALTGLEHGPDLAGLLPLIGRERAARRLSGAAA
Sequences:
>Translated_446_residues MTLVRFAPSPTGYLHIGNARPALLNALFARRTGGRFLLRLDDTDAERSTEAFAEAIGEDLAWLGIVPDLFARQSARTAQH DAAADRLRAAGRLYPCYETPEELERRRRRQLGRGQPPIYDRAALRLTGDERAALEAEGRRPHWRFLLEARTVGWDDLVRG PAHVDCASLSDPVLIRADGSYLYTLPSVVDDADLGITHVIRGEDHVTNTGVQVQIFEALGAAVPVFGHHNLLTTADGEGL SKRLGHLSLRGLREAGYEPAAVRSLAVLTGSAESVRAVPDLDTLAGLVDLGEISRAPARFDPAELDGLNARLIHAMPYRE AAARLADLGIPADRAEAFWLAVRANLSRVPEAAPWWRVVTGPVEPVLTEPAVIAAAVESLPPEPFGPETWNAWTTEIRTR TGAKGRGLFMPLRLALTGLEHGPDLAGLLPLIGRERAARRLSGAAA >Mature_445_residues TLVRFAPSPTGYLHIGNARPALLNALFARRTGGRFLLRLDDTDAERSTEAFAEAIGEDLAWLGIVPDLFARQSARTAQHD AAADRLRAAGRLYPCYETPEELERRRRRQLGRGQPPIYDRAALRLTGDERAALEAEGRRPHWRFLLEARTVGWDDLVRGP AHVDCASLSDPVLIRADGSYLYTLPSVVDDADLGITHVIRGEDHVTNTGVQVQIFEALGAAVPVFGHHNLLTTADGEGLS KRLGHLSLRGLREAGYEPAAVRSLAVLTGSAESVRAVPDLDTLAGLVDLGEISRAPARFDPAELDGLNARLIHAMPYREA AARLADLGIPADRAEAFWLAVRANLSRVPEAAPWWRVVTGPVEPVLTEPAVIAAAVESLPPEPFGPETWNAWTTEIRTRT GAKGRGLFMPLRLALTGLEHGPDLAGLLPLIGRERAARRLSGAAA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=487, Percent_Identity=29.9794661190965, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI62241042, Length=258, Percent_Identity=28.6821705426357, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1788743, Length=473, Percent_Identity=32.76955602537, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI226510925, Length=242, Percent_Identity=33.0578512396694, Blast_Score=88, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71993394, Length=468, Percent_Identity=28.2051282051282, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17511007, Length=108, Percent_Identity=35.1851851851852, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324540, Length=481, Percent_Identity=28.4823284823285, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321192, Length=217, Percent_Identity=29.4930875576037, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324742, Length=103, Percent_Identity=34.9514563106796, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665321, Length=479, Percent_Identity=31.1064718162839, Blast_Score=192, Evalue=3e-49,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE2_METRJ (B1M0I6)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001758191.1 - ProteinModelPortal: B1M0I6 - SMR: B1M0I6 - GeneID: 6141637 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_5563 - HOGENOM: HBG628189 - OMA: PHWRFKL - ProtClustDB: PRK12558 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 48358; Mature: 48227
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 242-242
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVRFAPSPTGYLHIGNARPALLNALFARRTGGRFLLRLDDTDAERSTEAFAEAIGEDL CEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCH AWLGIVPDLFARQSARTAQHDAAADRLRAAGRLYPCYETPEELERRRRRQLGRGQPPIYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC RAALRLTGDERAALEAEGRRPHWRFLLEARTVGWDDLVRGPAHVDCASLSDPVLIRADGS CEEEEECCCCCCEECCCCCCCCEEEEEECCCCCHHHHHCCCCCEECCCCCCCEEEEECCC YLYTLPSVVDDADLGITHVIRGEDHVTNTGVQVQIFEALGAAVPVFGHHNLLTTADGEGL EEEECCCHHCCCCCCEEEEECCCCCEECCCCEEEEHHHHCCCCCCCCCCCEEEECCCCCH SKRLGHLSLRGLREAGYEPAAVRSLAVLTGSAESVRAVPDLDTLAGLVDLGEISRAPARF HHHHHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHCCCCCCC DPAELDGLNARLIHAMPYREAAARLADLGIPADRAEAFWLAVRANLSRVPEAAPWWRVVT CCHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHEEEEEEHHHHHCCCCCCCCEEEC GPVEPVLTEPAVIAAAVESLPPEPFGPETWNAWTTEIRTRTGAKGRGLFMPLRLALTGLE CCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEHHHHHHHHCCC HGPDLAGLLPLIGRERAARRLSGAAA CCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLVRFAPSPTGYLHIGNARPALLNALFARRTGGRFLLRLDDTDAERSTEAFAEAIGEDL EEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCH AWLGIVPDLFARQSARTAQHDAAADRLRAAGRLYPCYETPEELERRRRRQLGRGQPPIYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC RAALRLTGDERAALEAEGRRPHWRFLLEARTVGWDDLVRGPAHVDCASLSDPVLIRADGS CEEEEECCCCCCEECCCCCCCCEEEEEECCCCCHHHHHCCCCCEECCCCCCCEEEEECCC YLYTLPSVVDDADLGITHVIRGEDHVTNTGVQVQIFEALGAAVPVFGHHNLLTTADGEGL EEEECCCHHCCCCCCEEEEECCCCCEECCCCEEEEHHHHCCCCCCCCCCCEEEECCCCCH SKRLGHLSLRGLREAGYEPAAVRSLAVLTGSAESVRAVPDLDTLAGLVDLGEISRAPARF HHHHHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHCCCCCCC DPAELDGLNARLIHAMPYREAAARLADLGIPADRAEAFWLAVRANLSRVPEAAPWWRVVT CCHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHEEEEEEHHHHHCCCCCCCCEEEC GPVEPVLTEPAVIAAAVESLPPEPFGPETWNAWTTEIRTRTGAKGRGLFMPLRLALTGLE CCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEHHHHHHHHCCC HGPDLAGLLPLIGRERAARRLSGAAA CCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA