| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is acm [H]
Identifier: 170751886
GI number: 170751886
Start: 5832976
End: 5833860
Strand: Direct
Name: acm [H]
Synonym: Mrad2831_5518
Alternate gene names: 170751886
Gene position: 5832976-5833860 (Clockwise)
Preceding gene: 170751884
Following gene: 170751887
Centisome position: 95.97
GC content: 68.93
Gene sequence:
>885_bases ATGTCGCGGATTTTAGAGCTTTCGCGGTCGCCGTTCGGGGAAGTCGCTCGGAACTTGAGCGAACGCCTGAGGCCGGCCCG TCGCCTCGCCGGCCGGTTCGCCGCCGCCGCCATCCTGGCCGGGCTCGCGGCCTGCGCGTCGAACAACGACTTCTACCCGA CCAAGGGCGACGTGAAGCCCCATCCGGGCGTGGCCAAGGCCAAGCTTCACCCGATCCAGGGCATCGACATCTCGAAGTGG CAGGGCAACGTCGACTGGGCCTCGGTCCGGGCCGCCGGCACCCAGTTCGCCTTCATCAAGGCCACCGAGGGTGGCGACCA CGTCGACGAGCGCTTCCGGACCAACTGGGACGCCGCCGCCCGGGCCGGCGTGCCGCGCGGGGCCTACCACTTCGTGTTCT GGTGCCGCTCCGCCAGGGAGCAGATGGACTGGTTCAAGAAGAACGTCCCGAACGACCCCACCGCGCTCCCGCCGGTCCTC GACGTCGAGTGGAACGGCCACTCGCAGACCTGCCCGAAGAAGCTGCCCAAGGCCCAGGCCCTGGCGATGGTCACCGAGAT GCTCGAGGAGATGGAGCGCTACACCGGCAAGCGCCCGATCATCTACACCGACATCACCTTCCACAAGGACGTCCTGGAGG GCGAGCTCCCCGACTACCCGCACTGGCTGCGCTCCACCGCGGCCGAGCCCGAGCAGCGCTTCGTCAACCGCAAGTGGATG CTGTGGCAGTTCACCTCCACGGGCCGGGTCCCGGGCGTGCGCGGCGACGTCGACCGCAACGCCTTCTACGGCACGCCGTC CGAGTGGGCCTCGTTCCTGGCCACCGACTGCGACCCGCGCGAGCACAAGCGGCTCTCGGAGCAGGGTCTCTGCACGGATA AGTAG
Upstream 100 bases:
>100_bases CCCGGAATTCCGCCGCAATGATCGCAAAGCTCCGTTAACCGCGCCGGGGCCATCGAATACGCCTGTCTGTGGCGCTTCTT CGGTGGCGGGCTAAACACTG
Downstream 100 bases:
>100_bases ATGAAAGCCTTCGGCAAAACCTAGGTTAGTTCAGGGGCGTAGAGCGCGGGGTATGGCTGACGGGCCCGCGCACCGGCGGG CGAGCCTCGAGAGGATCCTG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: 1,4-beta-N-acetylmuramidase M1 [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSRILELSRSPFGEVARNLSERLRPARRLAGRFAAAAILAGLAACASNNDFYPTKGDVKPHPGVAKAKLHPIQGIDISKW QGNVDWASVRAAGTQFAFIKATEGGDHVDERFRTNWDAAARAGVPRGAYHFVFWCRSAREQMDWFKKNVPNDPTALPPVL DVEWNGHSQTCPKKLPKAQALAMVTEMLEEMERYTGKRPIIYTDITFHKDVLEGELPDYPHWLRSTAAEPEQRFVNRKWM LWQFTSTGRVPGVRGDVDRNAFYGTPSEWASFLATDCDPREHKRLSEQGLCTDK
Sequences:
>Translated_294_residues MSRILELSRSPFGEVARNLSERLRPARRLAGRFAAAAILAGLAACASNNDFYPTKGDVKPHPGVAKAKLHPIQGIDISKW QGNVDWASVRAAGTQFAFIKATEGGDHVDERFRTNWDAAARAGVPRGAYHFVFWCRSAREQMDWFKKNVPNDPTALPPVL DVEWNGHSQTCPKKLPKAQALAMVTEMLEEMERYTGKRPIIYTDITFHKDVLEGELPDYPHWLRSTAAEPEQRFVNRKWM LWQFTSTGRVPGVRGDVDRNAFYGTPSEWASFLATDCDPREHKRLSEQGLCTDK >Mature_293_residues SRILELSRSPFGEVARNLSERLRPARRLAGRFAAAAILAGLAACASNNDFYPTKGDVKPHPGVAKAKLHPIQGIDISKWQ GNVDWASVRAAGTQFAFIKATEGGDHVDERFRTNWDAAARAGVPRGAYHFVFWCRSAREQMDWFKKNVPNDPTALPPVLD VEWNGHSQTCPKKLPKAQALAMVTEMLEEMERYTGKRPIIYTDITFHKDVLEGELPDYPHWLRSTAAEPEQRFVNRKWML WQFTSTGRVPGVRGDVDRNAFYGTPSEWASFLATDCDPREHKRLSEQGLCTDK
Specific function: This enzyme has both lysozyme (acetylmuramidase) and diacetylmuramidase activities [H]
COG id: COG3757
COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Gene ontology:
Cell location: Secreted, extracellular space [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 25 family [H]
Homologues:
Organism=Escherichia coli, GI87082043, Length=211, Percent_Identity=38.3886255924171, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002053 - InterPro: IPR008270 - InterPro: IPR017853 - InterPro: IPR018077 - InterPro: IPR013781 [H]
Pfam domain/function: PF01183 Glyco_hydro_25 [H]
EC number: =3.2.1.17 [H]
Molecular weight: Translated: 33198; Mature: 33067
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRILELSRSPFGEVARNLSERLRPARRLAGRFAAAAILAGLAACASNNDFYPTKGDVKP CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HPGVAKAKLHPIQGIDISKWQGNVDWASVRAAGTQFAFIKATEGGDHVDERFRTNWDAAA CCCCCCCEECCCCCCCHHCCCCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCHHHH RAGVPRGAYHFVFWCRSAREQMDWFKKNVPNDPTALPPVLDVEWNGHSQTCPKKLPKAQA HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCHHHH LAMVTEMLEEMERYTGKRPIIYTDITFHKDVLEGELPDYPHWLRSTAAEPEQRFVNRKWM HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCEE LWQFTSTGRVPGVRGDVDRNAFYGTPSEWASFLATDCDPREHKRLSEQGLCTDK EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SRILELSRSPFGEVARNLSERLRPARRLAGRFAAAAILAGLAACASNNDFYPTKGDVKP CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HPGVAKAKLHPIQGIDISKWQGNVDWASVRAAGTQFAFIKATEGGDHVDERFRTNWDAAA CCCCCCCEECCCCCCCHHCCCCCCCHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCHHHH RAGVPRGAYHFVFWCRSAREQMDWFKKNVPNDPTALPPVLDVEWNGHSQTCPKKLPKAQA HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCHHHH LAMVTEMLEEMERYTGKRPIIYTDITFHKDVLEGELPDYPHWLRSTAAEPEQRFVNRKWM HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCEE LWQFTSTGRVPGVRGDVDRNAFYGTPSEWASFLATDCDPREHKRLSEQGLCTDK EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2341041 [H]