| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751854
Identifier: 170751854
GI number: 170751854
Start: 5801586
End: 5802689
Strand: Direct
Name: 170751854
Synonym: Mrad2831_5486
Alternate gene names: NA
Gene position: 5801586-5802689 (Clockwise)
Preceding gene: 170751848
Following gene: 170751855
Centisome position: 95.45
GC content: 74.91
Gene sequence:
>1104_bases ATGTCGGGCGTGAGGCCGGATCTCTTCGCCCGCCTGCACGATGACCTTGAGTCCGGTTTCCGGGAGGACCTCGAGGAGGC GGTGGTCGACCCCGCGCGCTGGCCGGACCTGGCCGAGCGCGTTGTGCGAGCATCCGGCAGCGAGGGCGCCCTGCTGCTGC GCTCAGACCGGACCGGCCTCGAATCGCTCTGCACCGCCTCGCTCGCCGACGCCTCGCGCCGCTACTTCGACGAGGGCTGG CACCGCGACGACCATCGCCTCCGCGGTATCCCGCTCATGCGGACGCGCGGGATCGCGGTCGATCAGGACTTCACCACGCC GGAAGAGATCGCGCGCCTGCCCTTCTACCAGGACCTGCTGGCCTCCCGCGGCCTGCGCTGGTTCGCCGGCATCGGCTTCG CCGTGAAGGGGCGCCTGTGGTGCCTCTCGCTGCAGCGGACCGTGGAGCAGGGGCCGTACGAGCCGCACGAGCAGCGGCGC CTCGCGACCCTGTCGCCCCTCCTGCAGCGCGCGGGCCTGCTGACGTCGATGGTCGAGCGGGCCCGGCTCGCGGGGCTGAC GCAGGCCTTCGAGCTGATCGACCGCGCCGCCCTGATCCTCGACGCCGAGGGGCGGGCGCTCCGCTGGAACGACGCGTTCG GCGCCCTCCTGGGGCGAGACCTGAAGCTCGCGGGCGGCCGCCTCACCGCGGAGGATCCGGACGCCGCGCGGCAGCTCGAA GCGCTCGCGCGGCCCTTCGGTCGGCCGCCGATCTCCGCCGTCGTGGCGGCGCGACGCGACGGGCCGCCGATCGTGATCCA CGTCGTGCCGCTGGTCGGACCGAGCCGCGGCCTGTTCGCCGGCGCGAGCACGCTGCTCCTCGGGAGCGTTCCCGGGACCC CGGCCGCGCCCGCGACCGCGATCCTCCAGGCCGCCTACCGGCTGACGCCGGCCGAGGCGCGGCTCGCCCAGGCGCTGTCG AGCGGAACCTCCCTCGCGGAGGCCGCGTCGCGCTTCGCGATCACCGCGGCGACCGCGCGCTCGCAGCTGAAGGCGATCTT CGCCAAGACCGGAGCGAGCCGCCAGTCGGACCTCGTGCGGCTCGTGGCCGGGCTCGCGCGCTGA
Upstream 100 bases:
>100_bases GTGATCTATAGTTCGACGGTATGAAGCCGTACGGATCGAGGTCGATAGTTCGGCGGGCCGCTGTCGCGCGGCAGTATCCG TCACGGGGGAGGCGCGCGAC
Downstream 100 bases:
>100_bases CGGGTCACGGTCCCGAGAGGCGCGCGGAGCTGTCGGGTCGGCGCGGGAACGGCTCGGGCCACCCGCCCGTTGCAGCACCA ACGACAGGAGAAGTCTCGAT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; LuxR Family Regulatory Protein; Regulatory Protein LuxR
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSGVRPDLFARLHDDLESGFREDLEEAVVDPARWPDLAERVVRASGSEGALLLRSDRTGLESLCTASLADASRRYFDEGW HRDDHRLRGIPLMRTRGIAVDQDFTTPEEIARLPFYQDLLASRGLRWFAGIGFAVKGRLWCLSLQRTVEQGPYEPHEQRR LATLSPLLQRAGLLTSMVERARLAGLTQAFELIDRAALILDAEGRALRWNDAFGALLGRDLKLAGGRLTAEDPDAARQLE ALARPFGRPPISAVVAARRDGPPIVIHVVPLVGPSRGLFAGASTLLLGSVPGTPAAPATAILQAAYRLTPAEARLAQALS SGTSLAEAASRFAITAATARSQLKAIFAKTGASRQSDLVRLVAGLAR
Sequences:
>Translated_367_residues MSGVRPDLFARLHDDLESGFREDLEEAVVDPARWPDLAERVVRASGSEGALLLRSDRTGLESLCTASLADASRRYFDEGW HRDDHRLRGIPLMRTRGIAVDQDFTTPEEIARLPFYQDLLASRGLRWFAGIGFAVKGRLWCLSLQRTVEQGPYEPHEQRR LATLSPLLQRAGLLTSMVERARLAGLTQAFELIDRAALILDAEGRALRWNDAFGALLGRDLKLAGGRLTAEDPDAARQLE ALARPFGRPPISAVVAARRDGPPIVIHVVPLVGPSRGLFAGASTLLLGSVPGTPAAPATAILQAAYRLTPAEARLAQALS SGTSLAEAASRFAITAATARSQLKAIFAKTGASRQSDLVRLVAGLAR >Mature_366_residues SGVRPDLFARLHDDLESGFREDLEEAVVDPARWPDLAERVVRASGSEGALLLRSDRTGLESLCTASLADASRRYFDEGWH RDDHRLRGIPLMRTRGIAVDQDFTTPEEIARLPFYQDLLASRGLRWFAGIGFAVKGRLWCLSLQRTVEQGPYEPHEQRRL ATLSPLLQRAGLLTSMVERARLAGLTQAFELIDRAALILDAEGRALRWNDAFGALLGRDLKLAGGRLTAEDPDAARQLEA LARPFGRPPISAVVAARRDGPPIVIHVVPLVGPSRGLFAGASTLLLGSVPGTPAAPATAILQAAYRLTPAEARLAQALSS GTSLAEAASRFAITAATARSQLKAIFAKTGASRQSDLVRLVAGLAR
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39632; Mature: 39501
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVRPDLFARLHDDLESGFREDLEEAVVDPARWPDLAERVVRASGSEGALLLRSDRTGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCH ESLCTASLADASRRYFDEGWHRDDHRLRGIPLMRTRGIAVDQDFTTPEEIARLPFYQDLL HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEECCCCCCHHHHHHCCHHHHHH ASRGLRWFAGIGFAVKGRLWCLSLQRTVEQGPYEPHEQRRLATLSPLLQRAGLLTSMVER HHCCCHHHHHCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARLAGLTQAFELIDRAALILDAEGRALRWNDAFGALLGRDLKLAGGRLTAEDPDAARQLE HHHHHHHHHHHHHHHHHEEEECCCCEEEECHHHHHHHCCCCEECCCCCCCCCCHHHHHHH ALARPFGRPPISAVVAARRDGPPIVIHVVPLVGPSRGLFAGASTLLLGSVPGTPAAPATA HHHCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCHHHEEECCCCCCCCHHHH ILQAAYRLTPAEARLAQALSSGTSLAEAASRFAITAATARSQLKAIFAKTGASRQSDLVR HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LVAGLAR HHHHHCC >Mature Secondary Structure SGVRPDLFARLHDDLESGFREDLEEAVVDPARWPDLAERVVRASGSEGALLLRSDRTGL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCH ESLCTASLADASRRYFDEGWHRDDHRLRGIPLMRTRGIAVDQDFTTPEEIARLPFYQDLL HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEECCCCCCHHHHHHCCHHHHHH ASRGLRWFAGIGFAVKGRLWCLSLQRTVEQGPYEPHEQRRLATLSPLLQRAGLLTSMVER HHCCCHHHHHCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARLAGLTQAFELIDRAALILDAEGRALRWNDAFGALLGRDLKLAGGRLTAEDPDAARQLE HHHHHHHHHHHHHHHHHEEEECCCCEEEECHHHHHHHCCCCEECCCCCCCCCCHHHHHHH ALARPFGRPPISAVVAARRDGPPIVIHVVPLVGPSRGLFAGASTLLLGSVPGTPAAPATA HHHCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCHHHCCHHHEEECCCCCCCCHHHH ILQAAYRLTPAEARLAQALSSGTSLAEAASRFAITAATARSQLKAIFAKTGASRQSDLVR HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LVAGLAR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA