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The map label for this gene is ytfH [C]

Identifier: 170751630

GI number: 170751630

Start: 5577578

End: 5577985

Strand: Direct

Name: ytfH [C]

Synonym: Mrad2831_5256

Alternate gene names: 170751630

Gene position: 5577578-5577985 (Clockwise)

Preceding gene: 170751628

Following gene: 170751633

Centisome position: 91.77

GC content: 62.5

Gene sequence:

>408_bases
ATGAGCGACGTGAGCGGGCTGGCCGGCAAGTTCGACAGCTGGCAGCGCATGAGCTTCGATCCGGCCCGCTGTCCGGTCCG
GGACGTGCTCGATCACCTCGGCGACAAATGGACGACCTTGATCGTGATCGCGCTGGCCGGCGGCCCCCGGCGTTTCGGAG
AGCTGAACCGATCCATCCCGGATATCTCGAAGCGGATGTTGACGCAGTGTCTGCGGAACCTGGAGCGCGATGGGCTCATC
ACCCGCCACGTGTTCCCGACCAGTCCCCCGAGCGTCGAATATCGGTTGGCGGATCTGGGGCGCTCGCTGCTAGCCCCCCT
GCAAGCGTTGGTCGAATGGGCTGAAGCTAGTCATCAAAGCGTTCGCGATGCCCGTCTTCGATTCGATGGTGTTCCTTCAA
ATACCTAA

Upstream 100 bases:

>100_bases
CTTGCTGGTTCGGTTTCGGTACATGGTCTATAATTGAGACCGAAACCGCCCGTAAGGAGGCAGGTTTTGGGGACTTGATT
ACGTGGAAGGAACCACCGGG

Downstream 100 bases:

>100_bases
GGGCTGACGTTTGGCAGGTTGCGGAAGAGCCGTAATGAGCGGACCTCGCACCATGGTCCGCTTTGATGCATCCGCCGTCC
GTAAGCGGATGGGCAGGAAA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSDVSGLAGKFDSWQRMSFDPARCPVRDVLDHLGDKWTTLIVIALAGGPRRFGELNRSIPDISKRMLTQCLRNLERDGLI
TRHVFPTSPPSVEYRLADLGRSLLAPLQALVEWAEASHQSVRDARLRFDGVPSNT

Sequences:

>Translated_135_residues
MSDVSGLAGKFDSWQRMSFDPARCPVRDVLDHLGDKWTTLIVIALAGGPRRFGELNRSIPDISKRMLTQCLRNLERDGLI
TRHVFPTSPPSVEYRLADLGRSLLAPLQALVEWAEASHQSVRDARLRFDGVPSNT
>Mature_134_residues
SDVSGLAGKFDSWQRMSFDPARCPVRDVLDHLGDKWTTLIVIALAGGPRRFGELNRSIPDISKRMLTQCLRNLERDGLIT
RHVFPTSPPSVEYRLADLGRSLLAPLQALVEWAEASHQSVRDARLRFDGVPSNT

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=106, Percent_Identity=41.5094339622642, Blast_Score=89, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15112; Mature: 14981

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVSGLAGKFDSWQRMSFDPARCPVRDVLDHLGDKWTTLIVIALAGGPRRFGELNRSIP
CCCCCCHHCCCCCCHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCH
DISKRMLTQCLRNLERDGLITRHVFPTSPPSVEYRLADLGRSLLAPLQALVEWAEASHQS
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDARLRFDGVPSNT
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDVSGLAGKFDSWQRMSFDPARCPVRDVLDHLGDKWTTLIVIALAGGPRRFGELNRSIP
CCCCCHHCCCCCCHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCH
DISKRMLTQCLRNLERDGLITRHVFPTSPPSVEYRLADLGRSLLAPLQALVEWAEASHQS
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRDARLRFDGVPSNT
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]