| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is rsbT [H]
Identifier: 170751611
GI number: 170751611
Start: 5551546
End: 5552541
Strand: Direct
Name: rsbT [H]
Synonym: Mrad2831_5232
Alternate gene names: 170751611
Gene position: 5551546-5552541 (Clockwise)
Preceding gene: 170751610
Following gene: 170751612
Centisome position: 91.34
GC content: 72.79
Gene sequence:
>996_bases ATGGACCGCGTCACCGTCACCGAAGCGAGCCAGGTTGCCGAGGCGCGGCGACGGGCCGTCGCCGCCGCGCAATCCATCGG CTTCGACGAGACCGCGGCCGGCCGGGTGGCCCTGGTCGCGACCGAGCTCGCCACCAACATCGTCAAGTACGGCGTGCCCG GCGAGATCCTCGTCGGCACCTACGAGGACGGCACCGGCTCCGGGGTCGAGATCCTCGCCCTCGACAAGGGACCCGGCGTC TCGGACCTCGGGTCGGCCCTCCGCGACGGGCATTCCACCGGCGGCAGCCCCGGCGAGGGCCTCGGCGCGGTGCGGCGGCT GTCCGACGCGTTCGACATCGCCTCCCGGCCCGGCGGAGGCACCGCGGTGATGGCGCGTCTGTCGAGCGTGCGGCCGGCGG CCTCGCAAGCACTGCCGGCCTTCGGCGCGGTTACGGTGCCACTCAAGGGCGAGACGGCCAACGGCGATGCCTACGCGGTG CGCGAGCGGGCTGACGGCTGGACGGCCATCGTGGCCGATGGGCTCGGCCACGGGCCAGAGGCGGCCAAGGCGTCCGAGGA GGCCCTTCGGCTGTTCCACCGGAACCAGGACAGGCCGCCGGCCACGATCCTCGCCGCCATTCATGCGGGTCTCTCCCACA CCCGGGGCGGGGCGGTCTCCGTCGCGCGCTACGAGCGGGATCGGGAAACCGTCGCGCTCGCAGGCATCGGCAACGTGCTG GGGGCCGTCGTCTCCGGCACGGCAACCAAGCGAACGGTCAGCCTTGCCGGCACCGCCGGTCATGCGGCTAGGCGCATCCA GGAGTTCGAATACCCGATGCGGCAGGACGATCTCTTCGTGCTCTGCTCGGATGGCATTGCGACCGGATGGTCCCTCGACG CCTTCCCCGGCATCGCCCGGGCGCATCCGGCGCTCGTGGCGGGCCTGATCTACCGGGACTTCGCCCGGGTCCGCGACGAC GCTACCGTCCTCGTCGTTCGGGACGCCGCCGCATGA
Upstream 100 bases:
>100_bases GGCTGGGGCTCGGCGGAGCCAAGCGCCTCTCGAACGAGTTCCACATCGAGTCGACGCCCGGAGCAGGCACCCGCGTGACC ATCGCGCGCTGGAAGTAGGC
Downstream 100 bases:
>100_bases GGTGGCCGCTCCTCGCCACACAGGTCGAGCACGAGGACGACATCATCACGGTGCGCCAGCGCGTGCGCCGGCTGGCCGAG CGCCTCGGCTTCGAGGTCCA
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MDRVTVTEASQVAEARRRAVAAAQSIGFDETAAGRVALVATELATNIVKYGVPGEILVGTYEDGTGSGVEILALDKGPGV SDLGSALRDGHSTGGSPGEGLGAVRRLSDAFDIASRPGGGTAVMARLSSVRPAASQALPAFGAVTVPLKGETANGDAYAV RERADGWTAIVADGLGHGPEAAKASEEALRLFHRNQDRPPATILAAIHAGLSHTRGGAVSVARYERDRETVALAGIGNVL GAVVSGTATKRTVSLAGTAGHAARRIQEFEYPMRQDDLFVLCSDGIATGWSLDAFPGIARAHPALVAGLIYRDFARVRDD ATVLVVRDAAA
Sequences:
>Translated_331_residues MDRVTVTEASQVAEARRRAVAAAQSIGFDETAAGRVALVATELATNIVKYGVPGEILVGTYEDGTGSGVEILALDKGPGV SDLGSALRDGHSTGGSPGEGLGAVRRLSDAFDIASRPGGGTAVMARLSSVRPAASQALPAFGAVTVPLKGETANGDAYAV RERADGWTAIVADGLGHGPEAAKASEEALRLFHRNQDRPPATILAAIHAGLSHTRGGAVSVARYERDRETVALAGIGNVL GAVVSGTATKRTVSLAGTAGHAARRIQEFEYPMRQDDLFVLCSDGIATGWSLDAFPGIARAHPALVAGLIYRDFARVRDD ATVLVVRDAAA >Mature_331_residues MDRVTVTEASQVAEARRRAVAAAQSIGFDETAAGRVALVATELATNIVKYGVPGEILVGTYEDGTGSGVEILALDKGPGV SDLGSALRDGHSTGGSPGEGLGAVRRLSDAFDIASRPGGGTAVMARLSSVRPAASQALPAFGAVTVPLKGETANGDAYAV RERADGWTAIVADGLGHGPEAAKASEEALRLFHRNQDRPPATILAAIHAGLSHTRGGAVSVARYERDRETVALAGIGNVL GAVVSGTATKRTVSLAGTAGHAARRIQEFEYPMRQDDLFVLCSDGIATGWSLDAFPGIARAHPALVAGLIYRDFARVRDD ATVLVVRDAAA
Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 34014; Mature: 34014
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRVTVTEASQVAEARRRAVAAAQSIGFDETAAGRVALVATELATNIVKYGVPGEILVGT CCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEE YEDGTGSGVEILALDKGPGVSDLGSALRDGHSTGGSPGEGLGAVRRLSDAFDIASRPGGG ECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC TAVMARLSSVRPAASQALPAFGAVTVPLKGETANGDAYAVRERADGWTAIVADGLGHGPE HHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCC AAKASEEALRLFHRNQDRPPATILAAIHAGLSHTRGGAVSVARYERDRETVALAGIGNVL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCEEEEEHHHHHH GAVVSGTATKRTVSLAGTAGHAARRIQEFEYPMRQDDLFVLCSDGIATGWSLDAFPGIAR HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH AHPALVAGLIYRDFARVRDDATVLVVRDAAA HHHHHHHHHHHHHHHHHCCCCEEEEEECCCC >Mature Secondary Structure MDRVTVTEASQVAEARRRAVAAAQSIGFDETAAGRVALVATELATNIVKYGVPGEILVGT CCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEE YEDGTGSGVEILALDKGPGVSDLGSALRDGHSTGGSPGEGLGAVRRLSDAFDIASRPGGG ECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC TAVMARLSSVRPAASQALPAFGAVTVPLKGETANGDAYAVRERADGWTAIVADGLGHGPE HHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCC AAKASEEALRLFHRNQDRPPATILAAIHAGLSHTRGGAVSVARYERDRETVALAGIGNVL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCEEEEEHHHHHH GAVVSGTATKRTVSLAGTAGHAARRIQEFEYPMRQDDLFVLCSDGIATGWSLDAFPGIAR HHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHH AHPALVAGLIYRDFARVRDDATVLVVRDAAA HHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]