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The map label for this gene is yubM [H]

Identifier: 170751580

GI number: 170751580

Start: 5520586

End: 5522373

Strand: Reverse

Name: yubM [H]

Synonym: Mrad2831_5200

Alternate gene names: 170751580

Gene position: 5522373-5520586 (Counterclockwise)

Preceding gene: 170751581

Following gene: 170751579

Centisome position: 90.86

GC content: 71.87

Gene sequence:

>1788_bases
ATGCGCCAGACAGAGATCCAATTGTCCCAGCTCCGCCACGGCCACCACCCCGAGGCGCCCGCCGGCGTCGTCAACGTCCG
CGTGACCGGTCGCGATTTTGGCCTCGAAGCCCTCGCGGCGTCCATCCTGAGCCTCGGGGTGCTCCAGCCCCTCGTCGTCG
TCCCCGGGGACGCGGGCTTCCACTATGTCGTCGACGGGAACAGGCGCTTGGCCGCGCTCGAATCCCTGCTCGCCGAGGGG
AAGCTCACGGCGGACGCCGAGGTGCCCGTGATCGTGCGGGACGCCGGGACGGCCCGGGAGGCGGGCCTCGCCGCGAACGT
CCTGCAGACCCCGATGCACGAGGCCGACCAAATGTTGGCCTTCGCCGAACTGCGGCGGAACGGCATGACCGAGAAGGCCA
TCGCCGCCAAGTTCGCGCAGCCCGTCGCGACCGTCCGGAGGTTGCTCGCGCTCGGCGGGGTCTCGCCCGCGGTGCTCGAC
GCATGGCGCATCGGCAAGGTCCGCACCGATGACGTGAAGTCATTCACGCTGGCCTCGCACGCCGACCAGGACAGGGCGCT
CGCCAAGGTGTTGGCCGACGGGAGCGTCTGGCGCATCCGGGAGTACCTCGGCGCCAATGACGACATCGCCCACTTGCTCG
CCTACGTCGGCGCGAAGGCCTACAAGGCCGCCGGGGGCGTCGTCGTCGAGGACCTGTTCGGCAGCCGCGACGCTGTCTCC
GACGTCGCCCTCCTCAAGCGGCTGGCGGAAGAACGCCTCGACGCCGAGTGTGAGCGCCGGCGCCGGGACGGCTGGGAATG
GGTCGCGAAGGCCGACGACCTCCCGGCCGGCTGGAAGTGGACCTGGCCGCGCCTGTCGCACGGCTCCAGGCCGCTGACGG
ACGCTGAGCAGGCCAGGCTCGACGAGCTCAACGCCTTCCTCGACGCCGAGGATGACGGCAGCGTCACGGACGAAAAGTTA
GACGCCGCCGATGACGAGGCCGCCGCCATCAAGGCCTCCGCCCGCATGCCGCTGGGCTTGGAGGACCGCGCCCGGTCCGG
GGTCGTCGTGACGCTCGGGCGAGACGGCAAGATCAGCGTGGACGAGTACGTCGTCCGGCCCGAGGACACCCCGGCGAAGG
TGGCATCCGACGCGCCGGCGGCCGAGCCCGAGCCGGAGGAGAAGGGCCTGTCAGCCGCGCTGATCGACCGGCTGGCCGAA
CAGGCGACGGTCGCGGTGCAGGCGGCGCTCCCGTCCTCGCCGCGGGCGGCGCTCGCCATCCTCCTGGCGGGGACGCTCAG
CAAGAGCCGCGGGTCTGGACCGGTCCACATCACGCTGGGTGGTCTCGGCGGCGCCTTGGCGGAGGCCAACCAGGAAGGAC
GGTACGACCAGATCCTCGCCGGGCTGCTGACGAAGACGGTCGACGAGCTCCTCGACGTGGCGGCCGCCGTGGCCGGGCGC
GCCGTGTCGCTCCGGCACTACGACCACAGCGCCCCCGCGGACCGGCCAGCCGCCATGGCGTTGATGGGGGCCATCGACGT
GGACGCCATGGCCTCGGCCTTGGAGGACGCGTTCGACGGCGAGGCGTTCTTCAAGGCCATCCCGAAGGGCGCGATCCTCG
ACATCGTCGGGGAGGTCCTTGGCGAGGACGTCGCCCGGCAGGTCAAAAACAACAAGAAGGGCGACCTCGTCGAGATCGCG
GTCGCGAACGTCCTGCCGACCGGCTGGCTCCCGGCCGAGATCCGCCACCCCGGCTACGCGGGCCCGGGTGCGGTCGTCGC
CCCGGCCGAGGTCCAGGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
CCCGCCGCGGCCGCGCCTGCCACCCCGCCCCTGAGATCCCCGTCGCGCGCCAGGCGGCAGTGGCGTCCCCAAACACCACC
AACAGAAGGAGAGCGCTAAG

Downstream 100 bases:

>100_bases
TCGGAAACCCCGTCGCGCGCCAGGCGGCAGTGGCGCCCCACACCAGAAAAGCCCCCCCATCCAGTCCATCGAGGCAGACA
TGATCAAGCGTGAGCATCCC

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MRQTEIQLSQLRHGHHPEAPAGVVNVRVTGRDFGLEALAASILSLGVLQPLVVVPGDAGFHYVVDGNRRLAALESLLAEG
KLTADAEVPVIVRDAGTAREAGLAANVLQTPMHEADQMLAFAELRRNGMTEKAIAAKFAQPVATVRRLLALGGVSPAVLD
AWRIGKVRTDDVKSFTLASHADQDRALAKVLADGSVWRIREYLGANDDIAHLLAYVGAKAYKAAGGVVVEDLFGSRDAVS
DVALLKRLAEERLDAECERRRRDGWEWVAKADDLPAGWKWTWPRLSHGSRPLTDAEQARLDELNAFLDAEDDGSVTDEKL
DAADDEAAAIKASARMPLGLEDRARSGVVVTLGRDGKISVDEYVVRPEDTPAKVASDAPAAEPEPEEKGLSAALIDRLAE
QATVAVQAALPSSPRAALAILLAGTLSKSRGSGPVHITLGGLGGALAEANQEGRYDQILAGLLTKTVDELLDVAAAVAGR
AVSLRHYDHSAPADRPAAMALMGAIDVDAMASALEDAFDGEAFFKAIPKGAILDIVGEVLGEDVARQVKNNKKGDLVEIA
VANVLPTGWLPAEIRHPGYAGPGAVVAPAEVQAAA

Sequences:

>Translated_595_residues
MRQTEIQLSQLRHGHHPEAPAGVVNVRVTGRDFGLEALAASILSLGVLQPLVVVPGDAGFHYVVDGNRRLAALESLLAEG
KLTADAEVPVIVRDAGTAREAGLAANVLQTPMHEADQMLAFAELRRNGMTEKAIAAKFAQPVATVRRLLALGGVSPAVLD
AWRIGKVRTDDVKSFTLASHADQDRALAKVLADGSVWRIREYLGANDDIAHLLAYVGAKAYKAAGGVVVEDLFGSRDAVS
DVALLKRLAEERLDAECERRRRDGWEWVAKADDLPAGWKWTWPRLSHGSRPLTDAEQARLDELNAFLDAEDDGSVTDEKL
DAADDEAAAIKASARMPLGLEDRARSGVVVTLGRDGKISVDEYVVRPEDTPAKVASDAPAAEPEPEEKGLSAALIDRLAE
QATVAVQAALPSSPRAALAILLAGTLSKSRGSGPVHITLGGLGGALAEANQEGRYDQILAGLLTKTVDELLDVAAAVAGR
AVSLRHYDHSAPADRPAAMALMGAIDVDAMASALEDAFDGEAFFKAIPKGAILDIVGEVLGEDVARQVKNNKKGDLVEIA
VANVLPTGWLPAEIRHPGYAGPGAVVAPAEVQAAA
>Mature_595_residues
MRQTEIQLSQLRHGHHPEAPAGVVNVRVTGRDFGLEALAASILSLGVLQPLVVVPGDAGFHYVVDGNRRLAALESLLAEG
KLTADAEVPVIVRDAGTAREAGLAANVLQTPMHEADQMLAFAELRRNGMTEKAIAAKFAQPVATVRRLLALGGVSPAVLD
AWRIGKVRTDDVKSFTLASHADQDRALAKVLADGSVWRIREYLGANDDIAHLLAYVGAKAYKAAGGVVVEDLFGSRDAVS
DVALLKRLAEERLDAECERRRRDGWEWVAKADDLPAGWKWTWPRLSHGSRPLTDAEQARLDELNAFLDAEDDGSVTDEKL
DAADDEAAAIKASARMPLGLEDRARSGVVVTLGRDGKISVDEYVVRPEDTPAKVASDAPAAEPEPEEKGLSAALIDRLAE
QATVAVQAALPSSPRAALAILLAGTLSKSRGSGPVHITLGGLGGALAEANQEGRYDQILAGLLTKTVDELLDVAAAVAGR
AVSLRHYDHSAPADRPAAMALMGAIDVDAMASALEDAFDGEAFFKAIPKGAILDIVGEVLGEDVARQVKNNKKGDLVEIA
VANVLPTGWLPAEIRHPGYAGPGAVVAPAEVQAAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 62722; Mature: 62722

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTEIQLSQLRHGHHPEAPAGVVNVRVTGRDFGLEALAASILSLGVLQPLVVVPGDAGF
CCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCE
HYVVDGNRRLAALESLLAEGKLTADAEVPVIVRDAGTAREAGLAANVLQTPMHEADQMLA
EEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
FAELRRNGMTEKAIAAKFAQPVATVRRLLALGGVSPAVLDAWRIGKVRTDDVKSFTLASH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHC
ADQDRALAKVLADGSVWRIREYLGANDDIAHLLAYVGAKAYKAAGGVVVEDLFGSRDAVS
CCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHH
DVALLKRLAEERLDAECERRRRDGWEWVAKADDLPAGWKWTWPRLSHGSRPLTDAEQARL
HHHHHHHHHHHHHCHHHHHHHCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH
DELNAFLDAEDDGSVTDEKLDAADDEAAAIKASARMPLGLEDRARSGVVVTLGRDGKISV
HHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCEEH
DEYVVRPEDTPAKVASDAPAAEPEPEEKGLSAALIDRLAEQATVAVQAALPSSPRAALAI
HHEEECCCCCCHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHH
LLAGTLSKSRGSGPVHITLGGLGGALAEANQEGRYDQILAGLLTKTVDELLDVAAAVAGR
HHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
AVSLRHYDHSAPADRPAAMALMGAIDVDAMASALEDAFDGEAFFKAIPKGAILDIVGEVL
EEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHH
GEDVARQVKNNKKGDLVEIAVANVLPTGWLPAEIRHPGYAGPGAVVAPAEVQAAA
HHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCHHCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MRQTEIQLSQLRHGHHPEAPAGVVNVRVTGRDFGLEALAASILSLGVLQPLVVVPGDAGF
CCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCE
HYVVDGNRRLAALESLLAEGKLTADAEVPVIVRDAGTAREAGLAANVLQTPMHEADQMLA
EEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
FAELRRNGMTEKAIAAKFAQPVATVRRLLALGGVSPAVLDAWRIGKVRTDDVKSFTLASH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHC
ADQDRALAKVLADGSVWRIREYLGANDDIAHLLAYVGAKAYKAAGGVVVEDLFGSRDAVS
CCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEHHHHCCCHHHHH
DVALLKRLAEERLDAECERRRRDGWEWVAKADDLPAGWKWTWPRLSHGSRPLTDAEQARL
HHHHHHHHHHHHHCHHHHHHHCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHH
DELNAFLDAEDDGSVTDEKLDAADDEAAAIKASARMPLGLEDRARSGVVVTLGRDGKISV
HHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCEEH
DEYVVRPEDTPAKVASDAPAAEPEPEEKGLSAALIDRLAEQATVAVQAALPSSPRAALAI
HHEEECCCCCCHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHH
LLAGTLSKSRGSGPVHITLGGLGGALAEANQEGRYDQILAGLLTKTVDELLDVAAAVAGR
HHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
AVSLRHYDHSAPADRPAAMALMGAIDVDAMASALEDAFDGEAFFKAIPKGAILDIVGEVL
EEEEEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHH
GEDVARQVKNNKKGDLVEIAVANVLPTGWLPAEIRHPGYAGPGAVVAPAEVQAAA
HHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCHHCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]