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The map label for this gene is pdtaR [H]

Identifier: 170748720

GI number: 170748720

Start: 2436079

End: 2436666

Strand: Reverse

Name: pdtaR [H]

Synonym: Mrad2831_2302

Alternate gene names: 170748720

Gene position: 2436666-2436079 (Counterclockwise)

Preceding gene: 170748728

Following gene: 170748719

Centisome position: 40.09

GC content: 67.69

Gene sequence:

>588_bases
ATGACTGAGACCAATCTCACCGTCGCCGTGATCGACCCGAGCCGCGCCCGCGCGGCGATCCTGGAAGAGGGCCTGCGCGC
CGCCGGGATCGGGCGCGTGGTCGTGATTCCCGACACCGCCGACCTCATGGAGCGCGTCGCCGCCCTCAAGCCCGACGTGG
TGGTGATCCATCTGGAGAGCCCGAGCCGGGACATCCTGGAGCAGATGTCGGGCGTCTCCCGGCAGGTCGAGCGGCCGGTG
GCGATGTTCGTCGACCGCTCGGACTCGACCATGATGCAGGCCGCCGTCGATGCCGGGATCTCCGCCTACGTTGTGGACGG
CCTGCGGGCGGAACGGATCAAGTCGATCCTCGACATCGCGATCCTGCGCTTCAACGCCTTCGCGCGCCTCCAGCGCGAAC
TGACGGAGGCGCGGAGCGAACTCGCCGATCGCAAGCTGATCGAGCGGGCGAAGGGCATCTTGATGACCATGAAGGGCCTG
TCCGAGGACGAGGCGTACAAGCAGCTGCGCCGCAAGGCCATGAACGAGAAGCGCAAGATCGCCGACATCGCCCGGGCGAT
CGTCACCACCGCGGACCTGCTCGGATGA

Upstream 100 bases:

>100_bases
GTCCGCCGACGGGCGCGTCGCGGGCACGGGCCTTGCTTAGCGTCCGGTGGCCCGCGCCGGGCCGGCCTCCAGAAGAAGAC
CCGCCCCGTACCGGGCCAAG

Downstream 100 bases:

>100_bases
GGCTCCAGCTCGGCTACGTTCCGCTCTGCGATGCGGCCCCGCTGATCGCGGCCCACGAACTGGGCTTCACCCGGGCCGAG
GGGCTCGACCTCGACCTCAC

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTETNLTVAVIDPSRARAAILEEGLRAAGIGRVVVIPDTADLMERVAALKPDVVVIHLESPSRDILEQMSGVSRQVERPV
AMFVDRSDSTMMQAAVDAGISAYVVDGLRAERIKSILDIAILRFNAFARLQRELTEARSELADRKLIERAKGILMTMKGL
SEDEAYKQLRRKAMNEKRKIADIARAIVTTADLLG

Sequences:

>Translated_195_residues
MTETNLTVAVIDPSRARAAILEEGLRAAGIGRVVVIPDTADLMERVAALKPDVVVIHLESPSRDILEQMSGVSRQVERPV
AMFVDRSDSTMMQAAVDAGISAYVVDGLRAERIKSILDIAILRFNAFARLQRELTEARSELADRKLIERAKGILMTMKGL
SEDEAYKQLRRKAMNEKRKIADIARAIVTTADLLG
>Mature_194_residues
TETNLTVAVIDPSRARAAILEEGLRAAGIGRVVVIPDTADLMERVAALKPDVVVIHLESPSRDILEQMSGVSRQVERPVA
MFVDRSDSTMMQAAVDAGISAYVVDGLRAERIKSILDIAILRFNAFARLQRELTEARSELADRKLIERAKGILMTMKGLS
EDEAYKQLRRKAMNEKRKIADIARAIVTTADLLG

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21500; Mature: 21369

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETNLTVAVIDPSRARAAILEEGLRAAGIGRVVVIPDTADLMERVAALKPDVVVIHLES
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECC
PSRDILEQMSGVSRQVERPVAMFVDRSDSTMMQAAVDAGISAYVVDGLRAERIKSILDIA
CCHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ILRFNAFARLQRELTEARSELADRKLIERAKGILMTMKGLSEDEAYKQLRRKAMNEKRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ADIARAIVTTADLLG
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TETNLTVAVIDPSRARAAILEEGLRAAGIGRVVVIPDTADLMERVAALKPDVVVIHLES
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECC
PSRDILEQMSGVSRQVERPVAMFVDRSDSTMMQAAVDAGISAYVVDGLRAERIKSILDIA
CCHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ILRFNAFARLQRELTEARSELADRKLIERAKGILMTMKGLSEDEAYKQLRRKAMNEKRKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ADIARAIVTTADLLG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]