| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is dut [H]
Identifier: 170748704
GI number: 170748704
Start: 2415899
End: 2416369
Strand: Reverse
Name: dut [H]
Synonym: Mrad2831_2286
Alternate gene names: 170748704
Gene position: 2416369-2415899 (Counterclockwise)
Preceding gene: 170748705
Following gene: 170748702
Centisome position: 39.76
GC content: 76.43
Gene sequence:
>471_bases GTGAGCGACCTGCCCGAGGTCGGCCTGCGTCTGCTCGACCCGCGCCTGCCGGGCTGGGGCTTCCCGCGCTGGGGCTCGTC GGCCGCCGCCGGCCTCGACCTGCATGCCTGCCTCGACGCGCCCGTGGTCCTGCCGCCTCAGGGCAAGCCGGTCCTGATCC CCGCCGGCTTCACCGTCCTGATCCGCGACCCCGCCTGGTGCGGGCTGATCTTCCCCCGCTCCGGCCGCGGCCACCGCGAG GGCCTCGTGCTCGGCAACGGCACCGGCGTGATCGACGCGGATTACGAGGGCCCGCTGATGGTCTCCGCCTGGAACCGCGA CGCGTCGGAGCCCGTCCGGATCGAGCCCGGGGATCGGATCGCGCAGCTCGTCTTCACGCGGGTCACCCGGCCGGCGCTGA CCGTGCTGGAGGGGGCGCCCGGCCCCGGATCGGAGCGGGGCGCGGGCGGCTTCGGCTCGAGCGGGCGCTAG
Upstream 100 bases:
>100_bases GCGGGGTCGTCGCGGTGGACGGCAAGATGGTCGAGCGGCTCCACGTCGAGGCGGCCCGGCGGACACTCGCCATGGCCGAG GCGATCGCGCGGCTCTCCGC
Downstream 100 bases:
>100_bases GCCCCCGTCAGTCCAGCGTCTTGCCGAGCCGCCCGGCCAGGTCCTGGATGAACTGGAAGGCGGTCCGGCCCGAGCGCGAG CCGCGGGTCGTGGCCCATTC
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSDLPEVGLRLLDPRLPGWGFPRWGSSAAAGLDLHACLDAPVVLPPQGKPVLIPAGFTVLIRDPAWCGLIFPRSGRGHRE GLVLGNGTGVIDADYEGPLMVSAWNRDASEPVRIEPGDRIAQLVFTRVTRPALTVLEGAPGPGSERGAGGFGSSGR
Sequences:
>Translated_156_residues MSDLPEVGLRLLDPRLPGWGFPRWGSSAAAGLDLHACLDAPVVLPPQGKPVLIPAGFTVLIRDPAWCGLIFPRSGRGHRE GLVLGNGTGVIDADYEGPLMVSAWNRDASEPVRIEPGDRIAQLVFTRVTRPALTVLEGAPGPGSERGAGGFGSSGR >Mature_155_residues SDLPEVGLRLLDPRLPGWGFPRWGSSAAAGLDLHACLDAPVVLPPQGKPVLIPAGFTVLIRDPAWCGLIFPRSGRGHREG LVLGNGTGVIDADYEGPLMVSAWNRDASEPVRIEPGDRIAQLVFTRVTRPALTVLEGAPGPGSERGAGGFGSSGR
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=136, Percent_Identity=36.7647058823529, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI4503423, Length=151, Percent_Identity=35.7615894039735, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI70906441, Length=136, Percent_Identity=36.7647058823529, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790071, Length=154, Percent_Identity=42.8571428571429, Blast_Score=133, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71988561, Length=135, Percent_Identity=35.5555555555556, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319729, Length=143, Percent_Identity=35.6643356643357, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921126, Length=134, Percent_Identity=35.0746268656716, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24583610, Length=134, Percent_Identity=35.0746268656716, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16354; Mature: 16223
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLPEVGLRLLDPRLPGWGFPRWGSSAAAGLDLHACLDAPVVLPPQGKPVLIPAGFTVL CCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEHHCCCCEEECCCCCEEEEECCEEEE IRDPAWCGLIFPRSGRGHREGLVLGNGTGVIDADYEGPLMVSAWNRDASEPVRIEPGDRI EECCCEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCEEEEECCCCCCCCEEECCCHHH AQLVFTRVTRPALTVLEGAPGPGSERGAGGFGSSGR HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDLPEVGLRLLDPRLPGWGFPRWGSSAAAGLDLHACLDAPVVLPPQGKPVLIPAGFTVL CCCHHHHHEEECCCCCCCCCCCCCCCCCCCCEEEHHCCCCEEECCCCCEEEEECCEEEE IRDPAWCGLIFPRSGRGHREGLVLGNGTGVIDADYEGPLMVSAWNRDASEPVRIEPGDRI EECCCEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCEEEEECCCCCCCCEEECCCHHH AQLVFTRVTRPALTVLEGAPGPGSERGAGGFGSSGR HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA