| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is nqo3 [H]
Identifier: 170748471
GI number: 170748471
Start: 2183102
End: 2185183
Strand: Reverse
Name: nqo3 [H]
Synonym: Mrad2831_2053
Alternate gene names: 170748471
Gene position: 2185183-2183102 (Counterclockwise)
Preceding gene: 170748472
Following gene: 170748470
Centisome position: 35.95
GC content: 71.28
Gene sequence:
>2082_bases ATGACAAAAATCCTCGTCGACGGCACCGAGGTCGACGTCCCCGCCGATTACACGCTGCTCCAGGCCTGCGAGGCCGCGGG GGCCGAGATCCCGCGCTTCTGCTTCCACGAGCGCCTGTCGATCGCCGGCAATTGCCGCATGTGCCTCGTCGAGCTGAAGG GCGCGCCGAAGCCGGTGGCCTCCTGCGCCTACGCGGTGAAGGATTGCCGCCCCGGCCCGAACGGCGAGCCGCCGGAGGTG CTGACCCGCTCGCAGGGCACCAAGAAAGCGCGGGAAGGGGTGATGGAGTTCCTCCTCATCAACCACCCCCTCGACTGCCC GATCTGCGACCAGGGCGGCCACTGCGACCTGCAGGACCAGGCCATGGCCTACGGGGTCGATTCGACCCGCTACACGGAGA ACAAGCGCGCGGTCGAGGAGAAGCATATCGGGCCGCTGGTGCGGACCGCGATGAACCGCTGCATACACTGCACCCGCTGC GTGCGCTTCCTCGCCGAGGTGGCGGGCGTGCCCGACCTCGGCGCCATCGGTCGCGGCGAGGACATGGAGATCACCAGCTA CCTCGAGCAGTCGATGGCCTCGGAGCTTCAGGGCAACGTCGCCGACCTCTGCCCGGTCGGCGCCCTCGTGCACCGGCCGC AGAGCTACAACGTCCGCCCCTGGGAGCTGAACAAGACCGAGTCGGTCGACGTGATGGACGCGGTCGGCTCGTCGATCCGC ATCGACACCCGCGGCCGCGAGGTCATGCAGATCGAGCCGCGGATCAGCGAGGAGATCAACGAGGAGTGGATCTCCGACAA GACGCGCTACCACATCGATGGGCTGCGGATGCAGCGCCTCGACCGGCCCTACCTGCGCGAGAACGGTCGCCTGCGTCCCG CCTCCTGGGGTGAGGTTTTTCAGGCGATCGCCGCCAAGGTGAAGGGCGCGGATCCGAAGCGCATCGGCGCGATCGTCGGC GATCTTTCGGGCGTCGAGGAGATCTACGCGCTCCGCGAGCTGATGAAGGGTCTCGGCTCGCCGAACCTCGACTGCCGCCA GACCGATGCCGGCCTCGACCCGGCGCTCGGCCGCGCCTCCTACATCTTCAACCCGACGATCGCGGGCCTCGAGGCCGCGG ACGCGATCCTGATCGTCGGCGCCAACCCGCGCACCGAGGCCTCGCTGCTGAACGTGCGGATCCGCAAGCGCTGGCGCATG GCGCCGCTGGCGGTGGGCGTGATCGGCGAGCCGGTCGACCTGACCTATCCGAGCCACTACATCGGCGCCGGCCCCGATTC GCTGGCGGCGCTCGCCCGCGGCGAGCACAGCTTCCTCGACGTGCTCAAGGAGGCCAAGGCGCCGCTCGTGATCGTCGGCG CGAGCGCCGCGCCGGACGTCCTGGCCGCTGCAGCCTCCCTCGCGAAGGAGATCGGCGCGGTCTCGGCCGAGTGGAACGGC TTCGGCGTGCTGCACACGGCCGCTGCCCGGGTCGGGGCGCTCGATCTCGGCTTCGTGCCGGGGGAGGGCGGATTGACCTT CGCGCAGATGCTGGAGCCCGGCGCCCTCGACGTCCTGTTCAACCTCGGCGCCGACGAGCGTGACGTCGCCCCGGGCGCTT TCGTGGTCTACCAGGGCAGCCACGGAGATCGCGGGGCCTCCCGCGCCGACGTGATCCTGCCGGGGGCCGCCTATAGCGAG AAGTCGGCGACCTGGGTGAACACGGAAGGCCGGGTCCAGATGGGCAACCGCGCCGCCTTCCCGCCGGGCGACGCCCGCGA GGATTGGGCGATCCTGCGCGCCCTCTCGGACGTGCTGGGCAAGCGCCTGCCGTTCGACTCGCTCACCGCCCTCCGCCGGG CGCTCTACGCCGCCCACCCGCATCTGGCGGCGATCGGGGCCGTGGCGCCCGGCACCGTCGCGGAAGCGGTCGACCGGCTC GCCGGTCTCGGCGGCTCCGCGACCGGACCGGCCTTCGCGTCGCCGGTGACCGACTTCTATCTCACCAACCCGATCGCCCG CGCCTCGCGCATCCTCGCGGAGTGCTCGCGCCTCGCCCGGGAGCGCGCCGCCGAGGCGCGGCCCCTCGCGGCGGCCGAGT AG
Upstream 100 bases:
>100_bases CTGGCTGGCGTCCACCGGCGGATCGACAGGGTCGAGCTTCGCATCGAGCGGATCGAGCGACGCCTCGATCTCGCCGACGC CCCGCACTGAGATTGCACCG
Downstream 100 bases:
>100_bases GAGCTCAAGACCGATGACGCCGCTCGAAATCCTCGGGACCGTGCTCCTGATCGTGCTGAAGAGCTTCGTGCTCCTCTCGG CGCTCCTCGTCTTCATCGCC
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I, chain 3; NDH-1, chain 3 [H]
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MTKILVDGTEVDVPADYTLLQACEAAGAEIPRFCFHERLSIAGNCRMCLVELKGAPKPVASCAYAVKDCRPGPNGEPPEV LTRSQGTKKAREGVMEFLLINHPLDCPICDQGGHCDLQDQAMAYGVDSTRYTENKRAVEEKHIGPLVRTAMNRCIHCTRC VRFLAEVAGVPDLGAIGRGEDMEITSYLEQSMASELQGNVADLCPVGALVHRPQSYNVRPWELNKTESVDVMDAVGSSIR IDTRGREVMQIEPRISEEINEEWISDKTRYHIDGLRMQRLDRPYLRENGRLRPASWGEVFQAIAAKVKGADPKRIGAIVG DLSGVEEIYALRELMKGLGSPNLDCRQTDAGLDPALGRASYIFNPTIAGLEAADAILIVGANPRTEASLLNVRIRKRWRM APLAVGVIGEPVDLTYPSHYIGAGPDSLAALARGEHSFLDVLKEAKAPLVIVGASAAPDVLAAAASLAKEIGAVSAEWNG FGVLHTAAARVGALDLGFVPGEGGLTFAQMLEPGALDVLFNLGADERDVAPGAFVVYQGSHGDRGASRADVILPGAAYSE KSATWVNTEGRVQMGNRAAFPPGDAREDWAILRALSDVLGKRLPFDSLTALRRALYAAHPHLAAIGAVAPGTVAEAVDRL AGLGGSATGPAFASPVTDFYLTNPIARASRILAECSRLARERAAEARPLAAAE
Sequences:
>Translated_693_residues MTKILVDGTEVDVPADYTLLQACEAAGAEIPRFCFHERLSIAGNCRMCLVELKGAPKPVASCAYAVKDCRPGPNGEPPEV LTRSQGTKKAREGVMEFLLINHPLDCPICDQGGHCDLQDQAMAYGVDSTRYTENKRAVEEKHIGPLVRTAMNRCIHCTRC VRFLAEVAGVPDLGAIGRGEDMEITSYLEQSMASELQGNVADLCPVGALVHRPQSYNVRPWELNKTESVDVMDAVGSSIR IDTRGREVMQIEPRISEEINEEWISDKTRYHIDGLRMQRLDRPYLRENGRLRPASWGEVFQAIAAKVKGADPKRIGAIVG DLSGVEEIYALRELMKGLGSPNLDCRQTDAGLDPALGRASYIFNPTIAGLEAADAILIVGANPRTEASLLNVRIRKRWRM APLAVGVIGEPVDLTYPSHYIGAGPDSLAALARGEHSFLDVLKEAKAPLVIVGASAAPDVLAAAASLAKEIGAVSAEWNG FGVLHTAAARVGALDLGFVPGEGGLTFAQMLEPGALDVLFNLGADERDVAPGAFVVYQGSHGDRGASRADVILPGAAYSE KSATWVNTEGRVQMGNRAAFPPGDAREDWAILRALSDVLGKRLPFDSLTALRRALYAAHPHLAAIGAVAPGTVAEAVDRL AGLGGSATGPAFASPVTDFYLTNPIARASRILAECSRLARERAAEARPLAAAE >Mature_692_residues TKILVDGTEVDVPADYTLLQACEAAGAEIPRFCFHERLSIAGNCRMCLVELKGAPKPVASCAYAVKDCRPGPNGEPPEVL TRSQGTKKAREGVMEFLLINHPLDCPICDQGGHCDLQDQAMAYGVDSTRYTENKRAVEEKHIGPLVRTAMNRCIHCTRCV RFLAEVAGVPDLGAIGRGEDMEITSYLEQSMASELQGNVADLCPVGALVHRPQSYNVRPWELNKTESVDVMDAVGSSIRI DTRGREVMQIEPRISEEINEEWISDKTRYHIDGLRMQRLDRPYLRENGRLRPASWGEVFQAIAAKVKGADPKRIGAIVGD LSGVEEIYALRELMKGLGSPNLDCRQTDAGLDPALGRASYIFNPTIAGLEAADAILIVGANPRTEASLLNVRIRKRWRMA PLAVGVIGEPVDLTYPSHYIGAGPDSLAALARGEHSFLDVLKEAKAPLVIVGASAAPDVLAAAASLAKEIGAVSAEWNGF GVLHTAAARVGALDLGFVPGEGGLTFAQMLEPGALDVLFNLGADERDVAPGAFVVYQGSHGDRGASRADVILPGAAYSEK SATWVNTEGRVQMGNRAAFPPGDAREDWAILRALSDVLGKRLPFDSLTALRRALYAAHPHLAAIGAVAPGTVAEAVDRLA GLGGSATGPAFASPVTDFYLTNPIARASRILAECSRLARERAAEARPLAAAE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=706, Percent_Identity=48.8668555240793, Blast_Score=660, Evalue=0.0, Organism=Escherichia coli, GI145693161, Length=704, Percent_Identity=26.2784090909091, Blast_Score=197, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17565758, Length=699, Percent_Identity=46.6380543633763, Blast_Score=601, Evalue=1e-172, Organism=Caenorhabditis elegans, GI32566231, Length=587, Percent_Identity=48.381601362862, Blast_Score=541, Evalue=1e-154, Organism=Caenorhabditis elegans, GI193209088, Length=258, Percent_Identity=56.5891472868217, Blast_Score=307, Evalue=2e-83, Organism=Drosophila melanogaster, GI24640559, Length=690, Percent_Identity=48.8405797101449, Blast_Score=595, Evalue=1e-170, Organism=Drosophila melanogaster, GI24640557, Length=690, Percent_Identity=48.8405797101449, Blast_Score=595, Evalue=1e-170,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006656 - InterPro: IPR000283 - InterPro: IPR010228 - InterPro: IPR019574 - InterPro: IPR015405 [H]
Pfam domain/function: PF09326 DUF1982; PF00111 Fer2; PF00384 Molybdopterin; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 74071; Mature: 73940
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00642 COMPLEX1_75K_2 ; PS00643 COMPLEX1_75K_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILVDGTEVDVPADYTLLQACEAAGAEIPRFCFHERLSIAGNCRMCLVELKGAPKPVA CCEEEECCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHH SCAYAVKDCRPGPNGEPPEVLTRSQGTKKAREGVMEFLLINHPLDCPICDQGGHCDLQDQ HHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AMAYGVDSTRYTENKRAVEEKHIGPLVRTAMNRCIHCTRCVRFLAEVAGVPDLGAIGRGE HHHCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DMEITSYLEQSMASELQGNVADLCPVGALVHRPQSYNVRPWELNKTESVDVMDAVGSSIR CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEE IDTRGREVMQIEPRISEEINEEWISDKTRYHIDGLRMQRLDRPYLRENGRLRPASWGEVF EECCCCEEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCHHHCCCCCCCCCHHHHH QAIAAKVKGADPKRIGAIVGDLSGVEEIYALRELMKGLGSPNLDCRQTDAGLDPALGRAS HHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE YIFNPTIAGLEAADAILIVGANPRTEASLLNVRIRKRWRMAPLAVGVIGEPVDLTYPSHY EEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC IGAGPDSLAALARGEHSFLDVLKEAKAPLVIVGASAAPDVLAAAASLAKEIGAVSAEWNG CCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC FGVLHTAAARVGALDLGFVPGEGGLTFAQMLEPGALDVLFNLGADERDVAPGAFVVYQGS CCHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCEEHHEECCCCCCCCCCCEEEEEECC HGDRGASRADVILPGAAYSEKSATWVNTEGRVQMGNRAAFPPGDAREDWAILRALSDVLG CCCCCCCCCCEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH KRLPFDSLTALRRALYAAHPHLAAIGAVAPGTVAEAVDRLAGLGGSATGPAFASPVTDFY CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCHHHHH LTNPIARASRILAECSRLARERAAEARPLAAAE HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKILVDGTEVDVPADYTLLQACEAAGAEIPRFCFHERLSIAGNCRMCLVELKGAPKPVA CEEEECCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHH SCAYAVKDCRPGPNGEPPEVLTRSQGTKKAREGVMEFLLINHPLDCPICDQGGHCDLQDQ HHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AMAYGVDSTRYTENKRAVEEKHIGPLVRTAMNRCIHCTRCVRFLAEVAGVPDLGAIGRGE HHHCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DMEITSYLEQSMASELQGNVADLCPVGALVHRPQSYNVRPWELNKTESVDVMDAVGSSIR CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEE IDTRGREVMQIEPRISEEINEEWISDKTRYHIDGLRMQRLDRPYLRENGRLRPASWGEVF EECCCCEEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHCCCCHHHCCCCCCCCCHHHHH QAIAAKVKGADPKRIGAIVGDLSGVEEIYALRELMKGLGSPNLDCRQTDAGLDPALGRAS HHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE YIFNPTIAGLEAADAILIVGANPRTEASLLNVRIRKRWRMAPLAVGVIGEPVDLTYPSHY EEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC IGAGPDSLAALARGEHSFLDVLKEAKAPLVIVGASAAPDVLAAAASLAKEIGAVSAEWNG CCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC FGVLHTAAARVGALDLGFVPGEGGLTFAQMLEPGALDVLFNLGADERDVAPGAFVVYQGS CCHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCEEHHEECCCCCCCCCCCEEEEEECC HGDRGASRADVILPGAAYSEKSATWVNTEGRVQMGNRAAFPPGDAREDWAILRALSDVLG CCCCCCCCCCEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH KRLPFDSLTALRRALYAAHPHLAAIGAVAPGTVAEAVDRLAGLGGSATGPAFASPVTDFY CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCHHHHH LTNPIARASRILAECSRLARERAAEARPLAAAE HCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1605643; 8422400 [H]