| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is nuoI [H]
Identifier: 170748469
GI number: 170748469
Start: 2181549
End: 2182037
Strand: Reverse
Name: nuoI [H]
Synonym: Mrad2831_2051
Alternate gene names: 170748469
Gene position: 2182037-2181549 (Counterclockwise)
Preceding gene: 170748470
Following gene: 170748468
Centisome position: 35.9
GC content: 65.64
Gene sequence:
>489_bases ATGAAGCTCGATCAGGTCGCCAAGAGCCTTCTCCTGAAGGAGTTCGTGTCGGGGATGATCCTCGGCATGCGCTACTTCTT CAAGCCGAAGGCCACGATCAACTACCCCTTCGAGATGGGCCACCGCGGCCCGCGCTTCCGGGGCGAGCACGCCCTGCGCC GCTACCCCAACGGCGAGGAGCGCTGCATCGCCTGCAAGCTCTGCGAGGCGATCTGCCCGGCGCAGGCGATCACCATCGAG GCGGGCCCCCGCCGCAACGACGGCACACGCCGGACGACGCGCTACGACATCGACATGGTGAAGTGCATCTACTGCGGCAT GTGCCAGGAGGCCTGCCCGGTGGACGCCATCGTCGAGGGCCCCAACTTCGAATTCTCGGTGGAGACCCGGGAGGAGCTTC TCTACGACAAGCAGAAGCTCCTGCTGAACGGCGACCGCTGGGAGCGTGAGATCGCCCGCAACATCGCGATGGACGCGCCG TATCGCTGA
Upstream 100 bases:
>100_bases CCGATCTCCCTGATCTCGGTCGTCGTCGTCGCCTTCGTGCTCAAGCTGACCGGCCTCGCGCCGGGCGCCTGAGCCCACCC TTCGCATCGGAGATCCGGGC
Downstream 100 bases:
>100_bases CGCGTCGTCCCGAAGGGCGGCCGCCGGCTCTCGGAAGAAGATGATGCGAGAACAAGCCTCTAGAGCACCGTGCCGGTTCC CGTTTCCGGTGCGATCCTCT
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKLDQVAKSLLLKEFVSGMILGMRYFFKPKATINYPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIE AGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAIVEGPNFEFSVETREELLYDKQKLLLNGDRWEREIARNIAMDAP YR
Sequences:
>Translated_162_residues MKLDQVAKSLLLKEFVSGMILGMRYFFKPKATINYPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIE AGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAIVEGPNFEFSVETREELLYDKQKLLLNGDRWEREIARNIAMDAP YR >Mature_162_residues MKLDQVAKSLLLKEFVSGMILGMRYFFKPKATINYPFEMGHRGPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIE AGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAIVEGPNFEFSVETREELLYDKQKLLLNGDRWEREIARNIAMDAP YR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=159, Percent_Identity=73.5849056603774, Blast_Score=243, Evalue=7e-65, Organism=Escherichia coli, GI1788617, Length=143, Percent_Identity=37.7622377622378, Blast_Score=100, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17555194, Length=160, Percent_Identity=68.125, Blast_Score=224, Evalue=1e-59, Organism=Drosophila melanogaster, GI17864306, Length=159, Percent_Identity=71.0691823899371, Blast_Score=239, Evalue=8e-64,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 18749; Mature: 18749
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDQVAKSLLLKEFVSGMILGMRYFFKPKATINYPFEMGHRGPRFRGEHALRRYPNGEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCHHHHHCCCCCH RCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAIVEG HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECC PNFEFSVETREELLYDKQKLLLNGDRWEREIARNIAMDAPYR CCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLDQVAKSLLLKEFVSGMILGMRYFFKPKATINYPFEMGHRGPRFRGEHALRRYPNGEE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCHHHHHCCCCCH RCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGMCQEACPVDAIVEG HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEECC PNFEFSVETREELLYDKQKLLLNGDRWEREIARNIAMDAPYR CCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA