Click here to switch to the map view.

The map label for this gene is nuoJ [H]

Identifier: 170748468

GI number: 170748468

Start: 2180706

End: 2181326

Strand: Reverse

Name: nuoJ [H]

Synonym: Mrad2831_2050

Alternate gene names: 170748468

Gene position: 2181326-2180706 (Counterclockwise)

Preceding gene: 170748469

Following gene: 170748467

Centisome position: 35.89

GC content: 66.02

Gene sequence:

>621_bases
ATGACCGCAGCAGCCGCCTTCTTCTATCTGTTCGCGAGCATCACGGTCGCGTCGGGCTTCATGGTGATCGCCTCGCGCAA
TCCCGTCGCCTCGGTGCTGTTCCTGATCCTCGCCTTCGTGAACGCCGCCGGACTGTTCGTCCTGATGGGCGCCGAGTTCC
TCGCGATGATCCTCGTGGTCGTCTACGTCGGCGCGGTCGCGGTCCTGTTCCTGTTCGTCGTGATGATGCTCGACGTCGAT
TTCGCCGAGCTGCGCCAGGGCTTCCAGCAATACTTACCGATTGGCGCCCTGATCGGCGCGATCTTCCTGGTCGAGTTGCT
GCTGGTCGTCGGCTCGTGGAGCATCGACCCGGGCCTCGTCCAGGCCCCGCTCGGCAACGTCGCGGCCGCCGAGAACCTCA
CCAACGCCCAGGCGCTCGGCCGGGTGATCTACACGGACTACGCCTACTTCTTCCAGCTCGCCGGCCTGATCCTGCTGGTC
GCCATGATCGGCGCGATCGTGCTGACGCTGCGCGACCGGCCGGGTGTCAAGCGCCAGAGCATCGCGGTCCAGAACGCCCG
CACCCAGGCAATGGCGGTGGAGACCCGAAAGGTCCCGTCGCGCCAGGGTGTCGAGGTCTGA

Upstream 100 bases:

>100_bases
TGTGCCCCCGCCGACCGGGTTCTATAGACGGGCCGCCCGCTGCGGACCGTCTCCACGCACGGCAGAAGGGGCCGCTCCGG
CGGCCGATCCCGACCAGCGC

Downstream 100 bases:

>100_bases
TGATCGCCCGGAGATTCGAACGATGATCGGCCTGAGCCACTACCTCACCGTCGCGGCGATCCTGTTCACGCTCGGCGTGC
TCGGCATCTTCATCAACCGC

Product: NADH-ubiquinone/plastoquinone oxidoreductase subunit 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTAAAAFFYLFASITVASGFMVIASRNPVASVLFLILAFVNAAGLFVLMGAEFLAMILVVVYVGAVAVLFLFVVMMLDVD
FAELRQGFQQYLPIGALIGAIFLVELLLVVGSWSIDPGLVQAPLGNVAAAENLTNAQALGRVIYTDYAYFFQLAGLILLV
AMIGAIVLTLRDRPGVKRQSIAVQNARTQAMAVETRKVPSRQGVEV

Sequences:

>Translated_206_residues
MTAAAAFFYLFASITVASGFMVIASRNPVASVLFLILAFVNAAGLFVLMGAEFLAMILVVVYVGAVAVLFLFVVMMLDVD
FAELRQGFQQYLPIGALIGAIFLVELLLVVGSWSIDPGLVQAPLGNVAAAENLTNAQALGRVIYTDYAYFFQLAGLILLV
AMIGAIVLTLRDRPGVKRQSIAVQNARTQAMAVETRKVPSRQGVEV
>Mature_205_residues
TAAAAFFYLFASITVASGFMVIASRNPVASVLFLILAFVNAAGLFVLMGAEFLAMILVVVYVGAVAVLFLFVVMMLDVDF
AELRQGFQQYLPIGALIGAIFLVELLLVVGSWSIDPGLVQAPLGNVAAAENLTNAQALGRVIYTDYAYFFQLAGLILLVA
MIGAIVLTLRDRPGVKRQSIAVQNARTQAMAVETRKVPSRQGVEV

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=172, Percent_Identity=31.3953488372093, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 22051; Mature: 21919

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAAFFYLFASITVASGFMVIASRNPVASVLFLILAFVNAAGLFVLMGAEFLAMILVV
CCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVAVLFLFVVMMLDVDFAELRQGFQQYLPIGALIGAIFLVELLLVVGSWSIDPGLV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
QAPLGNVAAAENLTNAQALGRVIYTDYAYFFQLAGLILLVAMIGAIVLTLRDRPGVKRQS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IAVQNARTQAMAVETRKVPSRQGVEV
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TAAAAFFYLFASITVASGFMVIASRNPVASVLFLILAFVNAAGLFVLMGAEFLAMILVV
CHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVGAVAVLFLFVVMMLDVDFAELRQGFQQYLPIGALIGAIFLVELLLVVGSWSIDPGLV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
QAPLGNVAAAENLTNAQALGRVIYTDYAYFFQLAGLILLVAMIGAIVLTLRDRPGVKRQS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IAVQNARTQAMAVETRKVPSRQGVEV
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]