Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is mdeA [H]
Identifier: 170747124
GI number: 170747124
Start: 731854
End: 733146
Strand: Reverse
Name: mdeA [H]
Synonym: Mrad2831_0690
Alternate gene names: 170747124
Gene position: 733146-731854 (Counterclockwise)
Preceding gene: 170747125
Following gene: 170747121
Centisome position: 12.06
GC content: 70.92
Gene sequence:
>1293_bases ATGACGGACCAGAACCGACCGCACCGCTTCGCGACCCGGGCGATCCACGCCGGCGCGGCGCCGGATCCCGCCACGGGCGC GCGGGTCCAGCCGATCTACTTCACCAACGGCTTCGTCTTCGACTCGACCGAGCAGGCCGCCGACATCTTCGCCGGCCGCC GGACCGGCTTCTCCTACTCGCGCGGTTCCAACCCGACGGTCGCCGCGCTGGAGCGCCGGATCGCCGACCTGGAGGGCGCG AAGGCGGGGGTGGCGGTGTCCTCCGGGCAGTCCGCCATGCAGCTGGTCCTCATGACGCTGATGAAGAGCGGCGACGCCTA TGTGGCATCCCCGCGTCTGTTCGGCGGCTCGCTCGGCCTGATGCGCCGCCTCGACGGGCGCTACGACTTGAAGCCGCGCT TCGCGCGCGGCATGGCCCCCGAGGACTTCGAGGCGGCCATCACGCCGGACTGCCGGGCCATCTTCTGCGAATCGATCGTG AATCCCTGCGCGTCGGTGGTGGACCTCGACGGGATCGCCGCGGTGGCCCGCCGCCACAATCTGCCGCTCGTCGTGGACAA CACCCTGGCCTCGCCGGCCCTGATCCGGCCGATCGAGCACGGCGCCGACATCGTCTGGCACTCCACCTCCAAGTTCCTGA GCGGCTCCGGCCAGACCATCGGCGGCGTGATCTGCGACGCCGGCCGCTTCGACTGGGCGAAGGCCGGCGGCTACAACCTG ATCACCGAGCCTTGGCCGGACTACGACGGGCTGGTGCTCACCGAGGCCTTCCCGGCGACCCCCTTCGCGGCGGCGTGCCG GTTCTTCGGCCTGCGGGACCTCGGGCCCGGCCTGTCGCCGATGAACGCGTTCCTGACGCTCATGGGGATCGAGACCCTGC CGCTGCGCATGGAGCGGCACTGCGCCAACGCCCGGGCGGTGGCGGCCTTCCTGAAGGATCACCCGGCTGTGGCGTGGGTG AGCTACCCGATGCTGCCGGGCCAGCCCGGCGAGGACCTCGCCCGCCGCTATACCCCGGACGGGCCGGGCTCGATCTTCAC CTTCGCGCTGAAGGGCGGTGAGCCGGCGGCGCTGCGGTTCATCGCCGGACTCGAGCTGATCTCGCATCTGGTGAATATCG GCGAGATCAAGTCGCTGGCGATCCACCCGTCCTCGACCACGCATCGGCAACTGCCGGAGCACGAGAAGGCCGCCGCGCAG GTCGGGCCGGAGACCGTGCGGCTGTCGATCGGGCTGGAGAACGAGGCCGACCTGATCGCGGATCTCAAGCAGGCGCTGGA CCGCCTCCCCTGA
Upstream 100 bases:
>100_bases CTGGTCCGGACCCTGCAGGCCTTCATCCGCCGCGCGGCTTGACGCGGGGATCCGCCCGGGCTGACACCCGGTCCGGGCCC CGAACACCCGACCGAGAGCC
Downstream 100 bases:
>100_bases TCCGTCATCGCGCGCGCGGCGAAGCGACCCGGAGCCGCGCGATCGCGATCGCTGTGGCGCCGCTGAATCGCTCCGCTCCG CTCGCAAGGACGGCCGCGGC
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MTDQNRPHRFATRAIHAGAAPDPATGARVQPIYFTNGFVFDSTEQAADIFAGRRTGFSYSRGSNPTVAALERRIADLEGA KAGVAVSSGQSAMQLVLMTLMKSGDAYVASPRLFGGSLGLMRRLDGRYDLKPRFARGMAPEDFEAAITPDCRAIFCESIV NPCASVVDLDGIAAVARRHNLPLVVDNTLASPALIRPIEHGADIVWHSTSKFLSGSGQTIGGVICDAGRFDWAKAGGYNL ITEPWPDYDGLVLTEAFPATPFAAACRFFGLRDLGPGLSPMNAFLTLMGIETLPLRMERHCANARAVAAFLKDHPAVAWV SYPMLPGQPGEDLARRYTPDGPGSIFTFALKGGEPAALRFIAGLELISHLVNIGEIKSLAIHPSSTTHRQLPEHEKAAAQ VGPETVRLSIGLENEADLIADLKQALDRLP
Sequences:
>Translated_430_residues MTDQNRPHRFATRAIHAGAAPDPATGARVQPIYFTNGFVFDSTEQAADIFAGRRTGFSYSRGSNPTVAALERRIADLEGA KAGVAVSSGQSAMQLVLMTLMKSGDAYVASPRLFGGSLGLMRRLDGRYDLKPRFARGMAPEDFEAAITPDCRAIFCESIV NPCASVVDLDGIAAVARRHNLPLVVDNTLASPALIRPIEHGADIVWHSTSKFLSGSGQTIGGVICDAGRFDWAKAGGYNL ITEPWPDYDGLVLTEAFPATPFAAACRFFGLRDLGPGLSPMNAFLTLMGIETLPLRMERHCANARAVAAFLKDHPAVAWV SYPMLPGQPGEDLARRYTPDGPGSIFTFALKGGEPAALRFIAGLELISHLVNIGEIKSLAIHPSSTTHRQLPEHEKAAAQ VGPETVRLSIGLENEADLIADLKQALDRLP >Mature_429_residues TDQNRPHRFATRAIHAGAAPDPATGARVQPIYFTNGFVFDSTEQAADIFAGRRTGFSYSRGSNPTVAALERRIADLEGAK AGVAVSSGQSAMQLVLMTLMKSGDAYVASPRLFGGSLGLMRRLDGRYDLKPRFARGMAPEDFEAAITPDCRAIFCESIVN PCASVVDLDGIAAVARRHNLPLVVDNTLASPALIRPIEHGADIVWHSTSKFLSGSGQTIGGVICDAGRFDWAKAGGYNLI TEPWPDYDGLVLTEAFPATPFAAACRFFGLRDLGPGLSPMNAFLTLMGIETLPLRMERHCANARAVAAFLKDHPAVAWVS YPMLPGQPGEDLARRYTPDGPGSIFTFALKGGEPAALRFIAGLELISHLVNIGEIKSLAIHPSSTTHRQLPEHEKAAAQV GPETVRLSIGLENEADLIADLKQALDRLP
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=424, Percent_Identity=33.0188679245283, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI299473759, Length=424, Percent_Identity=31.1320754716981, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI25453487, Length=423, Percent_Identity=29.3144208037825, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI1790375, Length=422, Percent_Identity=30.8056872037915, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1789383, Length=434, Percent_Identity=24.1935483870968, Blast_Score=109, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71980708, Length=405, Percent_Identity=30.1234567901235, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17560056, Length=425, Percent_Identity=31.0588235294118, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17538055, Length=425, Percent_Identity=31.2941176470588, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6323333, Length=437, Percent_Identity=38.2151029748284, Blast_Score=276, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6319307, Length=427, Percent_Identity=30.4449648711944, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321254, Length=444, Percent_Identity=24.7747747747748, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6321170, Length=360, Percent_Identity=25, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI19922554, Length=432, Percent_Identity=30.5555555555556, Blast_Score=191, Evalue=7e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 46085; Mature: 45954
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQNRPHRFATRAIHAGAAPDPATGARVQPIYFTNGFVFDSTEQAADIFAGRRTGFSYS CCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEEECCCHHHHHHHHCCCCCCCCC RGSNPTVAALERRIADLEGAKAGVAVSSGQSAMQLVLMTLMKSGDAYVASPRLFGGSLGL CCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH MRRLDGRYDLKPRFARGMAPEDFEAAITPDCRAIFCESIVNPCASVVDLDGIAAVARRHN HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLVVDNTLASPALIRPIEHGADIVWHSTSKFLSGSGQTIGGVICDAGRFDWAKAGGYNL CCEEECCCCCCCHHHCHHHCCCCEEEECCHHHHCCCCCEECEEEECCCCCCCHHCCCCCC ITEPWPDYDGLVLTEAFPATPFAAACRFFGLRDLGPGLSPMNAFLTLMGIETLPLRMERH CCCCCCCCCCEEEECCCCCCCHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH CANARAVAAFLKDHPAVAWVSYPMLPGQPGEDLARRYTPDGPGSIFTFALKGGEPAALRF HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHH IAGLELISHLVNIGEIKSLAIHPSSTTHRQLPEHEKAAAQVGPETVRLSIGLENEADLIA HHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCEEEEEECCCCCHHHHH DLKQALDRLP HHHHHHHCCC >Mature Secondary Structure TDQNRPHRFATRAIHAGAAPDPATGARVQPIYFTNGFVFDSTEQAADIFAGRRTGFSYS CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEEECCCHHHHHHHHCCCCCCCCC RGSNPTVAALERRIADLEGAKAGVAVSSGQSAMQLVLMTLMKSGDAYVASPRLFGGSLGL CCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH MRRLDGRYDLKPRFARGMAPEDFEAAITPDCRAIFCESIVNPCASVVDLDGIAAVARRHN HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLVVDNTLASPALIRPIEHGADIVWHSTSKFLSGSGQTIGGVICDAGRFDWAKAGGYNL CCEEECCCCCCCHHHCHHHCCCCEEEECCHHHHCCCCCEECEEEECCCCCCCHHCCCCCC ITEPWPDYDGLVLTEAFPATPFAAACRFFGLRDLGPGLSPMNAFLTLMGIETLPLRMERH CCCCCCCCCCEEEECCCCCCCHHHHHHHHCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH CANARAVAAFLKDHPAVAWVSYPMLPGQPGEDLARRYTPDGPGSIFTFALKGGEPAALRF HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHH IAGLELISHLVNIGEIKSLAIHPSSTTHRQLPEHEKAAAQVGPETVRLSIGLENEADLIA HHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCEEEEEECCCCCHHHHH DLKQALDRLP HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]