Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is yusP [H]
Identifier: 170747102
GI number: 170747102
Start: 715314
End: 716786
Strand: Reverse
Name: yusP [H]
Synonym: Mrad2831_0668
Alternate gene names: 170747102
Gene position: 716786-715314 (Counterclockwise)
Preceding gene: 170747103
Following gene: 170747101
Centisome position: 11.79
GC content: 72.03
Gene sequence:
>1473_bases ATGCCCACGCCCTCAGAGACGCGCCGCCCGCTGGTCCTCGCCGCGGTGATGGCGGCGATGTTCATGATCGCCATCGAGGC GACGATCGTCTCGACGGCGATGCCGCAGATCGCCGGCCAGCTCGGCGACCTCCACCTCTACGCCTGGGTGTTCGCCTCCT TCCTGCTGACCCAGACGGCCACCACGGTGGTGTTCGGCAAGCTCTCGGACCTGTACGGGCGTCGGCCGGTGCTGCTGTTC GGCATCGCGGTGTTCCTGGCGGGCTCACTCCTGTGCGGGCTCGCGTGGTCCATGCCCTCGCTGATCCTGTTCCGCCTCAT CCAGGGCGTCGGCGCCGGGGCGATCCAGCCGGTGAGCCTGACCGTCGTCGGCGACCTGTACGCGGCGCGGGAACGCGGCC GGGTCCAGGGCTATCTCGCCAGCGTCTGGGGCATCTCCTCGGTGGCCGGCCCGCTGGTCGGCGGCCTGATCATCGGTCAC CTGAGCTGGCCCTGGATCTTCTGGATCAACCTGCCGGTCGGCGTGATCGCGGCCGGCCTGTTCCTGCGCTTCCTCCACGA GGGCGTCGAGCGCCGCCCTCGCCAGATCGACGCGATCGGCGCGGCCCTGTTCACCGCCGCCATCGCGGCGCTGATGATCG CGCTGACCGAGGCGGGCGAGTCGGCCGAGGCCGCCCTGTGGCCGGCGCTGGCCTTCGTGGTGGCCGCGCTCCTGTTCGTC GTCCAGGAGCGGCGCGCGCCGGACCCGATGCTCGACATCCGCCTGTGGATGCAGCGCCCCATCGCCACCGCCAACACCGC GACGCTCCTCTCCGGCATGACGGTGATCGGGCTCACGGCGTTCCTGCCGATGTACGTGCAGGGCGTGCTGCGGCAATCGC CCCTGATCGCCGGCCTGACCCTGACCCTGATGGTGCTCGGCTGGCCGATCGGCGCCACTACGGCGGCGCGCAGCTTCGTC CGGTTCGGCCTGCGCCCCATCCTGCTGGTCGGCGCGACGCTCCTGCCCCTCGGCGCGGTCGCCTTCGTCGCGCTCGGAAC GGACACCTCCCCGGTGGTGGCGGCCTGCGGCTCGGTCGTGATGGGGCTCGGCATGGGCTTCCTGTCCACCGCCGCCATCG TGATCATCCAGGACAGCGTCGCCTGGGCGCAGCGCGGGGCGGCGACGGCCTCGAACATCTTCTCGCGCAACCTCGGCTCG ACGCTCGGCGCGACCGTCCTCGGGGCCGTGCTGAATTACCGGCTCGCCAATCCGTCGAGCGGCCCGGCGGTGAATTCCGA TCAGCTCCGCCGCCTGCTCGACGATCCGGCAAGCCTCGGGGCCGGCGGGGAGGCGATCCGGGGCGGCCTGCAGCACGCGC TGCACGGCACGTTCTGGACGGTGTTCGCCGTGGCGGTGCTGACCCTGCTCCTGTCGCTGCTGGTCCCGCCGGTGGCGATC TCCGACCGGCCGCGCGAGCTCGCCGTGGAGTAG
Upstream 100 bases:
>100_bases CGCCCCGGGTATGTGCGCTCGCGCACGGATCTCGCCGCGGAGGAGCCGGATGCCGTGTTCAACGCTAGGTAGGCAGGCGC GGCGGGCCTAGACCGGCGCG
Downstream 100 bases:
>100_bases GCGGCGGAACCTTCCGATAGGACAGACGGCGCCGCTGTCGCGGCCAGCCCGGCTCGGGACGCGCACGAGCCCGTCTCCAC AGCGGCCCTTTGACTGTCCC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MPTPSETRRPLVLAAVMAAMFMIAIEATIVSTAMPQIAGQLGDLHLYAWVFASFLLTQTATTVVFGKLSDLYGRRPVLLF GIAVFLAGSLLCGLAWSMPSLILFRLIQGVGAGAIQPVSLTVVGDLYAARERGRVQGYLASVWGISSVAGPLVGGLIIGH LSWPWIFWINLPVGVIAAGLFLRFLHEGVERRPRQIDAIGAALFTAAIAALMIALTEAGESAEAALWPALAFVVAALLFV VQERRAPDPMLDIRLWMQRPIATANTATLLSGMTVIGLTAFLPMYVQGVLRQSPLIAGLTLTLMVLGWPIGATTAARSFV RFGLRPILLVGATLLPLGAVAFVALGTDTSPVVAACGSVVMGLGMGFLSTAAIVIIQDSVAWAQRGAATASNIFSRNLGS TLGATVLGAVLNYRLANPSSGPAVNSDQLRRLLDDPASLGAGGEAIRGGLQHALHGTFWTVFAVAVLTLLLSLLVPPVAI SDRPRELAVE
Sequences:
>Translated_490_residues MPTPSETRRPLVLAAVMAAMFMIAIEATIVSTAMPQIAGQLGDLHLYAWVFASFLLTQTATTVVFGKLSDLYGRRPVLLF GIAVFLAGSLLCGLAWSMPSLILFRLIQGVGAGAIQPVSLTVVGDLYAARERGRVQGYLASVWGISSVAGPLVGGLIIGH LSWPWIFWINLPVGVIAAGLFLRFLHEGVERRPRQIDAIGAALFTAAIAALMIALTEAGESAEAALWPALAFVVAALLFV VQERRAPDPMLDIRLWMQRPIATANTATLLSGMTVIGLTAFLPMYVQGVLRQSPLIAGLTLTLMVLGWPIGATTAARSFV RFGLRPILLVGATLLPLGAVAFVALGTDTSPVVAACGSVVMGLGMGFLSTAAIVIIQDSVAWAQRGAATASNIFSRNLGS TLGATVLGAVLNYRLANPSSGPAVNSDQLRRLLDDPASLGAGGEAIRGGLQHALHGTFWTVFAVAVLTLLLSLLVPPVAI SDRPRELAVE >Mature_489_residues PTPSETRRPLVLAAVMAAMFMIAIEATIVSTAMPQIAGQLGDLHLYAWVFASFLLTQTATTVVFGKLSDLYGRRPVLLFG IAVFLAGSLLCGLAWSMPSLILFRLIQGVGAGAIQPVSLTVVGDLYAARERGRVQGYLASVWGISSVAGPLVGGLIIGHL SWPWIFWINLPVGVIAAGLFLRFLHEGVERRPRQIDAIGAALFTAAIAALMIALTEAGESAEAALWPALAFVVAALLFVV QERRAPDPMLDIRLWMQRPIATANTATLLSGMTVIGLTAFLPMYVQGVLRQSPLIAGLTLTLMVLGWPIGATTAARSFVR FGLRPILLVGATLLPLGAVAFVALGTDTSPVVAACGSVVMGLGMGFLSTAAIVIIQDSVAWAQRGAATASNIFSRNLGST LGATVLGAVLNYRLANPSSGPAVNSDQLRRLLDDPASLGAGGEAIRGGLQHALHGTFWTVFAVAVLTLLLSLLVPPVAIS DRPRELAVE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=326, Percent_Identity=31.2883435582822, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI87081983, Length=304, Percent_Identity=30.5921052631579, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1789042, Length=287, Percent_Identity=30.3135888501742, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788710, Length=294, Percent_Identity=26.8707482993197, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1788392, Length=350, Percent_Identity=30.2857142857143, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790146, Length=172, Percent_Identity=29.6511627906977, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI48994889, Length=116, Percent_Identity=35.3448275862069, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788509, Length=144, Percent_Identity=29.8611111111111, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=547, Percent_Identity=24.6800731261426, Blast_Score=129, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6323735, Length=470, Percent_Identity=25.1063829787234, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321663, Length=171, Percent_Identity=34.5029239766082, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6319770, Length=424, Percent_Identity=25.7075471698113, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319783, Length=426, Percent_Identity=24.4131455399061, Blast_Score=90, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6325455, Length=529, Percent_Identity=20.6049149338374, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324264, Length=176, Percent_Identity=27.8409090909091, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51383; Mature: 51252
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPSETRRPLVLAAVMAAMFMIAIEATIVSTAMPQIAGQLGDLHLYAWVFASFLLTQTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TTVVFGKLSDLYGRRPVLLFGIAVFLAGSLLCGLAWSMPSLILFRLIQGVGAGAIQPVSL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE TVVGDLYAARERGRVQGYLASVWGISSVAGPLVGGLIIGHLSWPWIFWINLPVGVIAAGL EEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH FLRFLHEGVERRPRQIDAIGAALFTAAIAALMIALTEAGESAEAALWPALAFVVAALLFV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VQERRAPDPMLDIRLWMQRPIATANTATLLSGMTVIGLTAFLPMYVQGVLRQSPLIAGLT HHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LTLMVLGWPIGATTAARSFVRFGLRPILLVGATLLPLGAVAFVALGTDTSPVVAACGSVV HHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH MGLGMGFLSTAAIVIIQDSVAWAQRGAATASNIFSRNLGSTLGATVLGAVLNYRLANPSS HHHHHHHHHHHEEEEEECCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC GPAVNSDQLRRLLDDPASLGAGGEAIRGGLQHALHGTFWTVFAVAVLTLLLSLLVPPVAI CCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDRPRELAVE CCCCCCCCCC >Mature Secondary Structure PTPSETRRPLVLAAVMAAMFMIAIEATIVSTAMPQIAGQLGDLHLYAWVFASFLLTQTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH TTVVFGKLSDLYGRRPVLLFGIAVFLAGSLLCGLAWSMPSLILFRLIQGVGAGAIQPVSL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE TVVGDLYAARERGRVQGYLASVWGISSVAGPLVGGLIIGHLSWPWIFWINLPVGVIAAGL EEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH FLRFLHEGVERRPRQIDAIGAALFTAAIAALMIALTEAGESAEAALWPALAFVVAALLFV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VQERRAPDPMLDIRLWMQRPIATANTATLLSGMTVIGLTAFLPMYVQGVLRQSPLIAGLT HHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LTLMVLGWPIGATTAARSFVRFGLRPILLVGATLLPLGAVAFVALGTDTSPVVAACGSVV HHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH MGLGMGFLSTAAIVIIQDSVAWAQRGAATASNIFSRNLGSTLGATVLGAVLNYRLANPSS HHHHHHHHHHHEEEEEECCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC GPAVNSDQLRRLLDDPASLGAGGEAIRGGLQHALHGTFWTVFAVAVLTLLLSLLVPPVAI CCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDRPRELAVE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]