Click here to switch to the map view.

The map label for this gene is ydeP [H]

Identifier: 170746980

GI number: 170746980

Start: 585062

End: 587359

Strand: Reverse

Name: ydeP [H]

Synonym: Mrad2831_0546

Alternate gene names: 170746980

Gene position: 587359-585062 (Counterclockwise)

Preceding gene: 170746981

Following gene: 170746979

Centisome position: 9.66

GC content: 71.19

Gene sequence:

>2298_bases
ATGGCCCAGTCTGAAGGGTCCACCAAGCGCTCCTCCGCCGCCGGCGGGTGGGGTGCTCTGAAGAGCTGCGGCAAGCACCT
GCTCGGCAGCCGCGCACCCCTCACCGGCGCCCGCGCGCTGCTGAAGGCGAACCAGCCCGACGGGTTCGACTGCCCCGGCT
GCGCCTGGGGCGACCCGGAGCACGGCTCGTCCTTCGAGTTCTGCGAGAATGGCGTGAAGGCGGTCTCCTGGGAGGCGACC
GACAAGCGCACGACGCCGTCCTTCTTCGCCAAGCACACCCTGACCGAGCTGCGCGGCTGGAGCGACTACGCCCTGGAGGG
CCAGGGCCGCCTGACGCACCCGATGCGCTACGACGCGGCGAGCGACCGCTACCTGCCGGTGAGCTGGGACGAGGCCTTCG
CGGAGATCGGCGCGACCCTGCGCGGGCTCGACCATCCGGACCAGGCCGAGTTCTACACGTCGGGCCGGGCCTCCAACGAG
GCGGCGTACCTGTACCAGCTCTTCGCCCGCGCCTACGGGACCAACAACTTCCCCGACTGCTCGAACATGTGCCACGAGGC
GAGCGGCGTCGCGCTGATCGACGCGATCGGCATCGGCAAGGGCACGGTCCTGCTGGAGGATTTCGAGAAGGCGGACGCGA
TCTTCTGCGTCGGCCAGAATCCCGGCACCAACCATCCGCGGATGCTCGGCGACCTGCGCCGGGCAGCTGAGCGCGGCGCC
AAGGTGGTGGTCCTGAACCCGGTCCGCGAGCGCGGCCTGGAGCGGTTCGCCGACCCGCAGAACACCGTCGAGATGCTGCG
CGGCGCCAGCCGACCCATCGCCAGCCACTACCTGCAGCCGCGCTCGGGCGGCGACATGGCGGCCTTCCGGGGCATCGCCA
AGGTCGTGTTCGCGCGCGACGCCGAGGCGCTGGCGGCCGGCCGGACCTCGCTCCTCGACCGCGCCTTCCTGGATCACCAC
ACCGCCGGGCTCGACGCGTATCGCGCCGCCGTCGAGGCGACGTCCTGGGACGCGATCCTCGATCAGTCGGGCCTGACCAT
GGACGAGATCGCCGCGATGGCGGACGTCTATCTCGGCGCCCAGCGGGTCATCGCCACCTGGGCCATGGGCGTGACCCAGC
ACCGGCACTCGGTGGCGACGATCCGGGAGATCGCCAACCTGCTGTTCCTGCGCGGCCATATCGGCCGGCCCGGCGCGGGC
CTTTGCCCGGTGCGCGGCCATTCCAACGTGCAGGGCGACCGCACGGTCGGCATCAACGAGCGCCCCTCCGCCGCCTTCCT
GGATTCCCTGGAGCGCCATTTCGGGCTCGCCATGCCGCGCCGGCACGGCCACAACGTCCTGGCGGCGATCCGCGCCATGC
GGGACGGCACGTCGAAGGCCTTCATCGGGCTCGGCGGCAACTTCCTCCGGGCGACGCCCGACACGCCGGTCGTGGCGCAG
GCGCTGGCCTCGTGCCGGCTCACCGTGCACATCGCCACCAAGCTCAACCACGCCCATCTCGTGCCCGGCGCGGTCGGCTA
CCTGCTCCCCTGCCTCGGCCGCACCGAGATCGACCGGGGCGCCGAGGGCAAGATCCAGATCGTGACCGTCGAGGATTCGA
TGAGCATGGTCCACGGGTCGGGCGGCATCAACAAGCCGGCCTCGAAGGAGCTGCGCTCCGAGATCGCCATCATCGCCGGC
ATGGCGCAGGCCACCGTCGGCTCCGCCGCCATCGACTGGGCCGGGTTCGCCGCCGATTACGACCGGATCCGCGAGGCGAT
CGCCGCCACGATCCCGGGCTTCACCGGCTACAACACCCGGGTGCGCAAGCCGCGCGGCTTCATGCTGCGCAACCTCGCCG
CCGAGCGGGTGTTCGAGACGGTCACGGGCCGGGCCAACTTCTCGGCCGACGCCCTCCCGACCGAGACCGAGCATCAGGCC
GCCCGGAAGACCCGCGACACCTACGTGTTGCAGACCTTCCGCAGCCACGACCAGTACAACACGACGATCTACGGCCTGGA
TGACCGCTACCGTGGCGTCTACGGCGAGCGCCGCGTGATCTTCGCCCACCCGGACGACCTCGCGGAGATCCGCGACCGGC
TCGGCGATCGGGTCGACGTCGTCGGCACGCACGACGACGGCATCACCCGCCGGGCGGAGGATTTCCGCCTCGTGCCGTTC
GACATGCCGCGGGGCGCCCTGGCTGGCTACTACCCGGAGCTGAACGTGCTGGTGCCGCTCTCGACCTCCGGCGAGAAGAG
CGACACGCCGACCTCCAAGTCGGTTCTGGTCACCCTGCAGGCGCGCGCGGCGGCGTGA

Upstream 100 bases:

>100_bases
TGCATGAGGGGCCTGCGCCGACACGCCGTTGTGAGAGACCTGGAGAGACGCTTATCTCGCGCTTGCGAGACACGTCGCGT
CAGCCAATCCAGGACGGTTC

Downstream 100 bases:

>100_bases
GCGGGGGGCTCGACGAGGCGGCGTTCGTCGCCGCCCTCGACCGGGTCTCGGCCGCCCGGCCGGATCTCGACCCGCTGGCG
GCGGGCCTCCTGGCGGCGCT

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 764

Protein sequence:

>765_residues
MAQSEGSTKRSSAAGGWGALKSCGKHLLGSRAPLTGARALLKANQPDGFDCPGCAWGDPEHGSSFEFCENGVKAVSWEAT
DKRTTPSFFAKHTLTELRGWSDYALEGQGRLTHPMRYDAASDRYLPVSWDEAFAEIGATLRGLDHPDQAEFYTSGRASNE
AAYLYQLFARAYGTNNFPDCSNMCHEASGVALIDAIGIGKGTVLLEDFEKADAIFCVGQNPGTNHPRMLGDLRRAAERGA
KVVVLNPVRERGLERFADPQNTVEMLRGASRPIASHYLQPRSGGDMAAFRGIAKVVFARDAEALAAGRTSLLDRAFLDHH
TAGLDAYRAAVEATSWDAILDQSGLTMDEIAAMADVYLGAQRVIATWAMGVTQHRHSVATIREIANLLFLRGHIGRPGAG
LCPVRGHSNVQGDRTVGINERPSAAFLDSLERHFGLAMPRRHGHNVLAAIRAMRDGTSKAFIGLGGNFLRATPDTPVVAQ
ALASCRLTVHIATKLNHAHLVPGAVGYLLPCLGRTEIDRGAEGKIQIVTVEDSMSMVHGSGGINKPASKELRSEIAIIAG
MAQATVGSAAIDWAGFAADYDRIREAIAATIPGFTGYNTRVRKPRGFMLRNLAAERVFETVTGRANFSADALPTETEHQA
ARKTRDTYVLQTFRSHDQYNTTIYGLDDRYRGVYGERRVIFAHPDDLAEIRDRLGDRVDVVGTHDDGITRRAEDFRLVPF
DMPRGALAGYYPELNVLVPLSTSGEKSDTPTSKSVLVTLQARAAA

Sequences:

>Translated_765_residues
MAQSEGSTKRSSAAGGWGALKSCGKHLLGSRAPLTGARALLKANQPDGFDCPGCAWGDPEHGSSFEFCENGVKAVSWEAT
DKRTTPSFFAKHTLTELRGWSDYALEGQGRLTHPMRYDAASDRYLPVSWDEAFAEIGATLRGLDHPDQAEFYTSGRASNE
AAYLYQLFARAYGTNNFPDCSNMCHEASGVALIDAIGIGKGTVLLEDFEKADAIFCVGQNPGTNHPRMLGDLRRAAERGA
KVVVLNPVRERGLERFADPQNTVEMLRGASRPIASHYLQPRSGGDMAAFRGIAKVVFARDAEALAAGRTSLLDRAFLDHH
TAGLDAYRAAVEATSWDAILDQSGLTMDEIAAMADVYLGAQRVIATWAMGVTQHRHSVATIREIANLLFLRGHIGRPGAG
LCPVRGHSNVQGDRTVGINERPSAAFLDSLERHFGLAMPRRHGHNVLAAIRAMRDGTSKAFIGLGGNFLRATPDTPVVAQ
ALASCRLTVHIATKLNHAHLVPGAVGYLLPCLGRTEIDRGAEGKIQIVTVEDSMSMVHGSGGINKPASKELRSEIAIIAG
MAQATVGSAAIDWAGFAADYDRIREAIAATIPGFTGYNTRVRKPRGFMLRNLAAERVFETVTGRANFSADALPTETEHQA
ARKTRDTYVLQTFRSHDQYNTTIYGLDDRYRGVYGERRVIFAHPDDLAEIRDRLGDRVDVVGTHDDGITRRAEDFRLVPF
DMPRGALAGYYPELNVLVPLSTSGEKSDTPTSKSVLVTLQARAAA
>Mature_764_residues
AQSEGSTKRSSAAGGWGALKSCGKHLLGSRAPLTGARALLKANQPDGFDCPGCAWGDPEHGSSFEFCENGVKAVSWEATD
KRTTPSFFAKHTLTELRGWSDYALEGQGRLTHPMRYDAASDRYLPVSWDEAFAEIGATLRGLDHPDQAEFYTSGRASNEA
AYLYQLFARAYGTNNFPDCSNMCHEASGVALIDAIGIGKGTVLLEDFEKADAIFCVGQNPGTNHPRMLGDLRRAAERGAK
VVVLNPVRERGLERFADPQNTVEMLRGASRPIASHYLQPRSGGDMAAFRGIAKVVFARDAEALAAGRTSLLDRAFLDHHT
AGLDAYRAAVEATSWDAILDQSGLTMDEIAAMADVYLGAQRVIATWAMGVTQHRHSVATIREIANLLFLRGHIGRPGAGL
CPVRGHSNVQGDRTVGINERPSAAFLDSLERHFGLAMPRRHGHNVLAAIRAMRDGTSKAFIGLGGNFLRATPDTPVVAQA
LASCRLTVHIATKLNHAHLVPGAVGYLLPCLGRTEIDRGAEGKIQIVTVEDSMSMVHGSGGINKPASKELRSEIAIIAGM
AQATVGSAAIDWAGFAADYDRIREAIAATIPGFTGYNTRVRKPRGFMLRNLAAERVFETVTGRANFSADALPTETEHQAA
RKTRDTYVLQTFRSHDQYNTTIYGLDDRYRGVYGERRVIFAHPDDLAEIRDRLGDRVDVVGTHDDGITRRAEDFRLVPFD
MPRGALAGYYPELNVLVPLSTSGEKSDTPTSKSVLVTLQARAAA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=750, Percent_Identity=49.8666666666667, Blast_Score=752, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=375, Percent_Identity=29.6, Blast_Score=151, Evalue=1e-37,
Organism=Escherichia coli, GI3868720, Length=381, Percent_Identity=26.246719160105, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 82829; Mature: 82698

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSEGSTKRSSAAGGWGALKSCGKHLLGSRAPLTGARALLKANQPDGFDCPGCAWGDPE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
HGSSFEFCENGVKAVSWEATDKRTTPSFFAKHTLTELRGWSDYALEGQGRLTHPMRYDAA
CCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEECCCC
SDRYLPVSWDEAFAEIGATLRGLDHPDQAEFYTSGRASNEAAYLYQLFARAYGTNNFPDC
CCCEECCCHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCH
SNMCHEASGVALIDAIGIGKGTVLLEDFEKADAIFCVGQNPGTNHPRMLGDLRRAAERGA
HHHHHHCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC
KVVVLNPVRERGLERFADPQNTVEMLRGASRPIASHYLQPRSGGDMAAFRGIAKVVFARD
EEEEECCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCC
AEALAAGRTSLLDRAFLDHHTAGLDAYRAAVEATSWDAILDQSGLTMDEIAAMADVYLGA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHH
QRVIATWAMGVTQHRHSVATIREIANLLFLRGHIGRPGAGLCPVRGHSNVQGDRTVGINE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
RPSAAFLDSLERHFGLAMPRRHGHNVLAAIRAMRDGTSKAFIGLGGNFLRATPDTPVVAQ
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHH
ALASCRLTVHIATKLNHAHLVPGAVGYLLPCLGRTEIDRGAEGKIQIVTVEDSMSMVHGS
HHHHCEEEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHCCC
GGINKPASKELRSEIAIIAGMAQATVGSAAIDWAGFAADYDRIREAIAATIPGFTGYNTR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VRKPRGFMLRNLAAERVFETVTGRANFSADALPTETEHQAARKTRDTYVLQTFRSHDQYN
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
TTIYGLDDRYRGVYGERRVIFAHPDDLAEIRDRLGDRVDVVGTHDDGITRRAEDFRLVPF
CEEEECCHHHCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEC
DMPRGALAGYYPELNVLVPLSTSGEKSDTPTSKSVLVTLQARAAA
CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
AQSEGSTKRSSAAGGWGALKSCGKHLLGSRAPLTGARALLKANQPDGFDCPGCAWGDPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
HGSSFEFCENGVKAVSWEATDKRTTPSFFAKHTLTELRGWSDYALEGQGRLTHPMRYDAA
CCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCEECCCC
SDRYLPVSWDEAFAEIGATLRGLDHPDQAEFYTSGRASNEAAYLYQLFARAYGTNNFPDC
CCCEECCCHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCH
SNMCHEASGVALIDAIGIGKGTVLLEDFEKADAIFCVGQNPGTNHPRMLGDLRRAAERGA
HHHHHHCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC
KVVVLNPVRERGLERFADPQNTVEMLRGASRPIASHYLQPRSGGDMAAFRGIAKVVFARD
EEEEECCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCC
AEALAAGRTSLLDRAFLDHHTAGLDAYRAAVEATSWDAILDQSGLTMDEIAAMADVYLGA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHH
QRVIATWAMGVTQHRHSVATIREIANLLFLRGHIGRPGAGLCPVRGHSNVQGDRTVGINE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
RPSAAFLDSLERHFGLAMPRRHGHNVLAAIRAMRDGTSKAFIGLGGNFLRATPDTPVVAQ
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHH
ALASCRLTVHIATKLNHAHLVPGAVGYLLPCLGRTEIDRGAEGKIQIVTVEDSMSMVHGS
HHHHCEEEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHCCC
GGINKPASKELRSEIAIIAGMAQATVGSAAIDWAGFAADYDRIREAIAATIPGFTGYNTR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VRKPRGFMLRNLAAERVFETVTGRANFSADALPTETEHQAARKTRDTYVLQTFRSHDQYN
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
TTIYGLDDRYRGVYGERRVIFAHPDDLAEIRDRLGDRVDVVGTHDDGITRRAEDFRLVPF
CEEEECCHHHCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEC
DMPRGALAGYYPELNVLVPLSTSGEKSDTPTSKSVLVTLQARAAA
CCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]