Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
---|---|
Accession | NC_010505 |
Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is mdcB [H]
Identifier: 170746797
GI number: 170746797
Start: 385399
End: 386367
Strand: Reverse
Name: mdcB [H]
Synonym: Mrad2831_0351
Alternate gene names: 170746797
Gene position: 386367-385399 (Counterclockwise)
Preceding gene: 170746798
Following gene: 170746796
Centisome position: 6.36
GC content: 75.54
Gene sequence:
>969_bases ATGCGCGGGCGCCGCCATCCGGTATACGTCGGACCGCCCGACGCCGCTTCGGCTGCGCTGGCGAAGCCGGGAGGAGGCCC GACCCTGCGCGACGAACAGAGCCTGACTGCGCCGGATGCCGACGCGTGCCGCGCCGACGCGCCCAGCGCCGGTCGCGTCG CGGATCTTGCGCACGCGGCGCTCATCGGCGAATTGGAGACATGGCCCAAGCCCGGCCTCGTGAGCCCGGTCGATTCCGGC AGCCACGACGACATGGATGCGGAGACTCTCCGCCGCAGCGCGGCGGCGATCCGGCCGTTCTTCGCGGAGCTGGTCGCGGC GGGTGCCCGCGCGGCGGAGATGGCGGATTTGCGGGCCATCGGTCTGAAAGCCGAGATCGCGATGATGCGGGCGACGGGCG GCGTCAACGCGCATCGGGGCGCGATCTTCTCGCTCGGCCTGATCTGCGCCGCGGCGGGAGCGAAAGGTGAAGGGCACGGT GTCGGGCGGGCCGGGGCCGAGGCCCTGGCCGAGGCGGTTGGGCATCTCTGGGGGCCGGCGATCAGCCGGGCACCGGTCTC GGCTGTCAGCCACGGCGGCCGCGCGGCGCGGCGCTTCGGCGTCGGCGGCGCCAGTGCCGAGGCCGCTTCGGGCTTCCCGA CCATCCGGGCCGTCGGCCTTCCCGCCCTCCGCTTCGGCCGTTCCTGCGCCCCCGGCGATCCCGAGGCGGCGCGCGTGCAC TGCTTCTTCGCGCTCCTGGCGGTCGTCGATGACACGAATCTCCTGCACCGCGGCGGCGCCGACGGCCTCGTCGGCGCGCG CGCGGCCGCCGCGACCTTTCTCGACGCCGGCGGCATCGCGGCTCCGGCTTGGCGCGAGCGCGCGGCGGCGATCCACCGCT CTTTCGTGGCCGCGCGCCTGAGTCCCGGCGGCTGCGCCGATCTCCTCGCCGCGACGCTGCTGCTGGACGCCCTGGCCTCC GCGCCCTGA
Upstream 100 bases:
>100_bases TAAGAGTGTGGTCCAGGCGCCCGACCTCTGGCAGCTGCCCGAACGCTTCGTCGGTTCCTTCTAAGTCCGGATAGGCGACC CCGCGCGGAGACCGTCGCGG
Downstream 100 bases:
>100_bases CGCGCGAGCAGCCCCGGGTCGCGTCGGTCGCAGTTTCGCGGGTGCGGTCGATACCTACATCCGGATCCTGTTCCCCCTCC CCCGCCGGACCGCCCGTGAC
Product: triphosphoribosyl-dephospho-CoA synthase MdcB
Products: NA
Alternate protein names: 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRGRRHPVYVGPPDAASAALAKPGGGPTLRDEQSLTAPDADACRADAPSAGRVADLAHAALIGELETWPKPGLVSPVDSG SHDDMDAETLRRSAAAIRPFFAELVAAGARAAEMADLRAIGLKAEIAMMRATGGVNAHRGAIFSLGLICAAAGAKGEGHG VGRAGAEALAEAVGHLWGPAISRAPVSAVSHGGRAARRFGVGGASAEAASGFPTIRAVGLPALRFGRSCAPGDPEAARVH CFFALLAVVDDTNLLHRGGADGLVGARAAAATFLDAGGIAAPAWRERAAAIHRSFVAARLSPGGCADLLAATLLLDALAS AP
Sequences:
>Translated_322_residues MRGRRHPVYVGPPDAASAALAKPGGGPTLRDEQSLTAPDADACRADAPSAGRVADLAHAALIGELETWPKPGLVSPVDSG SHDDMDAETLRRSAAAIRPFFAELVAAGARAAEMADLRAIGLKAEIAMMRATGGVNAHRGAIFSLGLICAAAGAKGEGHG VGRAGAEALAEAVGHLWGPAISRAPVSAVSHGGRAARRFGVGGASAEAASGFPTIRAVGLPALRFGRSCAPGDPEAARVH CFFALLAVVDDTNLLHRGGADGLVGARAAAATFLDAGGIAAPAWRERAAAIHRSFVAARLSPGGCADLLAATLLLDALAS AP >Mature_322_residues MRGRRHPVYVGPPDAASAALAKPGGGPTLRDEQSLTAPDADACRADAPSAGRVADLAHAALIGELETWPKPGLVSPVDSG SHDDMDAETLRRSAAAIRPFFAELVAAGARAAEMADLRAIGLKAEIAMMRATGGVNAHRGAIFSLGLICAAAGAKGEGHG VGRAGAEALAEAVGHLWGPAISRAPVSAVSHGGRAARRFGVGGASAEAASGFPTIRAVGLPALRFGRSCAPGDPEAARVH CFFALLAVVDDTNLLHRGGADGLVGARAAAATFLDAGGIAAPAWRERAAAIHRSFVAARLSPGGCADLLAATLLLDALAS AP
Specific function: Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase [H]
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitG/MdcB family [H]
Homologues:
Organism=Escherichia coli, GI1786830, Length=268, Percent_Identity=36.9402985074627, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002736 - InterPro: IPR017555 [H]
Pfam domain/function: PF01874 CitG [H]
EC number: =2.7.8.25 [H]
Molecular weight: Translated: 32217; Mature: 32217
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRRHPVYVGPPDAASAALAKPGGGPTLRDEQSLTAPDADACRADAPSAGRVADLAHAA CCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH LIGELETWPKPGLVSPVDSGSHDDMDAETLRRSAAAIRPFFAELVAAGARAAEMADLRAI HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GLKAEIAMMRATGGVNAHRGAIFSLGLICAAAGAKGEGHGVGRAGAEALAEAVGHLWGPA CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHH ISRAPVSAVSHGGRAARRFGVGGASAEAASGFPTIRAVGLPALRFGRSCAPGDPEAARVH HHCCHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHH CFFALLAVVDDTNLLHRGGADGLVGARAAAATFLDAGGIAAPAWRERAAAIHRSFVAARL HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC SPGGCADLLAATLLLDALASAP CCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRGRRHPVYVGPPDAASAALAKPGGGPTLRDEQSLTAPDADACRADAPSAGRVADLAHAA CCCCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHH LIGELETWPKPGLVSPVDSGSHDDMDAETLRRSAAAIRPFFAELVAAGARAAEMADLRAI HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GLKAEIAMMRATGGVNAHRGAIFSLGLICAAAGAKGEGHGVGRAGAEALAEAVGHLWGPA CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHH ISRAPVSAVSHGGRAARRFGVGGASAEAASGFPTIRAVGLPALRFGRSCAPGDPEAARVH HHCCHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHH CFFALLAVVDDTNLLHRGGADGLVGARAAAATFLDAGGIAAPAWRERAAAIHRSFVAARL HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC SPGGCADLLAATLLLDALASAP CCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10561613 [H]