| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yajR [C]
Identifier: 170746732
GI number: 170746732
Start: 305316
End: 306617
Strand: Reverse
Name: yajR [C]
Synonym: Mrad2831_0283
Alternate gene names: 170746732
Gene position: 306617-305316 (Counterclockwise)
Preceding gene: 170746733
Following gene: 170746731
Centisome position: 5.04
GC content: 72.43
Gene sequence:
>1302_bases TTGACGCAGGACATGAGCGAGCGAGGAAAGACGGATCCGGCCCCGCGGGAACCGTCCAACGCCCGAGCCCTCGATCTGCT CAATCTCCTGCTCATCGACGTCAATGGGGCGATCAAGCCCTATCTGAACGTGTACCTCTTTGTGCATCGCGGCTGGGACG ACGCCGCGATCGGGCTGGTCGGCACGGTGTCGGGGATCGTCGGCATCGCGGCGCAGACGCCGATCGGGACCGCCATCGAC GCCGTGGGCGACAAGCGGCGGATCCTGCTCGGGGCGCTCGTGGCCCTGTCACTCGCCACCGTGCTCGTCGCCGTGGCGCC GCACTTCTGGCCCGTCCTCGCCGCCTCCTGCGTCCTCGCCGCGGTCGGCGGGATGCTCAGCCCGACGATCGCGACGCTGA CCCTCGGGCTGTTCCCGGCCGGGAAACTGCCCCGGCGCTTCGGCCGCAACGCGGCCTTAGAGCGGACAGGGAACGTGGCC ATCGCGGGACTGATCGGCCTCGTGGGCTGGCTGTTCCCGGACCGCGCCGTCTTCCTGCTCGTCCCGGCCTGCGCGATCGT CTCCGCCGCAGCGCTCTACGCGATACCCCGCCGGGCGATCGACGCGCGGCGGGCCCGCGGGGGCGGCGAAGGCGGGGCGG ACGCGGCGCCGACGCGCTGGCGGACGCTGCTGACCTGCCGTCCGCTGATGGTCTTCGCGGTCTGCGTGATGCTGTTCCAC TTCGCCAACGCGCCGCTGCTGACGCTGGTGGCGCAGGAGATCGGCCAGACCCGGCCGGACTGGTCGTCCGTCATCGTCTC CGTCTGCATCATCGGCGCGCAGGCGGTGATGGTGCCGATGGGCCTCCTCGTCGGCCGCCGGGCCGAGCGCTGGGGCCGTA AGCCGCTACTGGTGATCGGCTTCGCCGCCCTGCCCGCGCGGGCCCTGCTCTATCTCGTCTGGCGCGACCCGTTCTGGCTC ATCGCCGTCCAATGCCTCGACGGCGTCGGCGCCGGGCTGCTGAGCGCGGTCAAACCCCTGGTGATGGCCGACATCACCCG CGGGACTGGCCGCTACAACGCCGCCCACGGATTGATCGGGACCCTTCAGGGCGCGGGCGCGGCGCTGTCCTTCGTCATCG CCGGGAGCCTCGTCCAGGCGGCCGGATTCCACGCGGCCTACCTCGCCTGCGCCGCGGTGGCCGTTGCGGCGCTCGCGGTG CTGGTGCTGCTGATGCCGGAGAGCGCCCTAGACGCGCCGCGCGGCGGCCCGGGCGCGTGGCTGCGGGGTCTCGTGCCCGG TAGCGTGTCGGGAAGCGCGTAG
Upstream 100 bases:
>100_bases GTTCGCGGCGACGGGCCCTCCCGGTGACCGTCCGGAAGTGGGCCGCCCCCTCCGGGCCGGCGCCCGGTGCCCTAGGTTGG CTGAAAAGGGAGCCAGCCGG
Downstream 100 bases:
>100_bases GGAGGAATCATGAGGCGTCGAATCACCGGTGCGGGGCGCCGCGCGCGGGCTGCCTGCCTCGCCGGTCTCGTCGTGTTCGC CCTCCCAGCGGTTGCCCCGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTQDMSERGKTDPAPREPSNARALDLLNLLLIDVNGAIKPYLNVYLFVHRGWDDAAIGLVGTVSGIVGIAAQTPIGTAID AVGDKRRILLGALVALSLATVLVAVAPHFWPVLAASCVLAAVGGMLSPTIATLTLGLFPAGKLPRRFGRNAALERTGNVA IAGLIGLVGWLFPDRAVFLLVPACAIVSAAALYAIPRRAIDARRARGGGEGGADAAPTRWRTLLTCRPLMVFAVCVMLFH FANAPLLTLVAQEIGQTRPDWSSVIVSVCIIGAQAVMVPMGLLVGRRAERWGRKPLLVIGFAALPARALLYLVWRDPFWL IAVQCLDGVGAGLLSAVKPLVMADITRGTGRYNAAHGLIGTLQGAGAALSFVIAGSLVQAAGFHAAYLACAAVAVAALAV LVLLMPESALDAPRGGPGAWLRGLVPGSVSGSA
Sequences:
>Translated_433_residues MTQDMSERGKTDPAPREPSNARALDLLNLLLIDVNGAIKPYLNVYLFVHRGWDDAAIGLVGTVSGIVGIAAQTPIGTAID AVGDKRRILLGALVALSLATVLVAVAPHFWPVLAASCVLAAVGGMLSPTIATLTLGLFPAGKLPRRFGRNAALERTGNVA IAGLIGLVGWLFPDRAVFLLVPACAIVSAAALYAIPRRAIDARRARGGGEGGADAAPTRWRTLLTCRPLMVFAVCVMLFH FANAPLLTLVAQEIGQTRPDWSSVIVSVCIIGAQAVMVPMGLLVGRRAERWGRKPLLVIGFAALPARALLYLVWRDPFWL IAVQCLDGVGAGLLSAVKPLVMADITRGTGRYNAAHGLIGTLQGAGAALSFVIAGSLVQAAGFHAAYLACAAVAVAALAV LVLLMPESALDAPRGGPGAWLRGLVPGSVSGSA >Mature_432_residues TQDMSERGKTDPAPREPSNARALDLLNLLLIDVNGAIKPYLNVYLFVHRGWDDAAIGLVGTVSGIVGIAAQTPIGTAIDA VGDKRRILLGALVALSLATVLVAVAPHFWPVLAASCVLAAVGGMLSPTIATLTLGLFPAGKLPRRFGRNAALERTGNVAI AGLIGLVGWLFPDRAVFLLVPACAIVSAAALYAIPRRAIDARRARGGGEGGADAAPTRWRTLLTCRPLMVFAVCVMLFHF ANAPLLTLVAQEIGQTRPDWSSVIVSVCIIGAQAVMVPMGLLVGRRAERWGRKPLLVIGFAALPARALLYLVWRDPFWLI AVQCLDGVGAGLLSAVKPLVMADITRGTGRYNAAHGLIGTLQGAGAALSFVIAGSLVQAAGFHAAYLACAAVAVAALAVL VLLMPESALDAPRGGPGAWLRGLVPGSVSGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44848; Mature: 44716
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDMSERGKTDPAPREPSNARALDLLNLLLIDVNGAIKPYLNVYLFVHRGWDDAAIGLV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEEEECCCCHHHHHH GTVSGIVGIAAQTPIGTAIDAVGDKRRILLGALVALSLATVLVAVAPHFWPVLAASCVLA HHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGGMLSPTIATLTLGLFPAGKLPRRFGRNAALERTGNVAIAGLIGLVGWLFPDRAVFLL HHCCHHCHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHH VPACAIVSAAALYAIPRRAIDARRARGGGEGGADAAPTRWRTLLTCRPLMVFAVCVMLFH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FANAPLLTLVAQEIGQTRPDWSSVIVSVCIIGAQAVMVPMGLLVGRRAERWGRKPLLVIG HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEE FAALPARALLYLVWRDPFWLIAVQCLDGVGAGLLSAVKPLVMADITRGTGRYNAAHGLIG HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TLQGAGAALSFVIAGSLVQAAGFHAAYLACAAVAVAALAVLVLLMPESALDAPRGGPGAW HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHH LRGLVPGSVSGSA HHCCCCCCCCCCC >Mature Secondary Structure TQDMSERGKTDPAPREPSNARALDLLNLLLIDVNGAIKPYLNVYLFVHRGWDDAAIGLV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEEEECCCCHHHHHH GTVSGIVGIAAQTPIGTAIDAVGDKRRILLGALVALSLATVLVAVAPHFWPVLAASCVLA HHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGGMLSPTIATLTLGLFPAGKLPRRFGRNAALERTGNVAIAGLIGLVGWLFPDRAVFLL HHCCHHCHHHHHHHHHHCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHH VPACAIVSAAALYAIPRRAIDARRARGGGEGGADAAPTRWRTLLTCRPLMVFAVCVMLFH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FANAPLLTLVAQEIGQTRPDWSSVIVSVCIIGAQAVMVPMGLLVGRRAERWGRKPLLVIG HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEE FAALPARALLYLVWRDPFWLIAVQCLDGVGAGLLSAVKPLVMADITRGTGRYNAAHGLIG HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TLQGAGAALSFVIAGSLVQAAGFHAAYLACAAVAVAALAVLVLLMPESALDAPRGGPGAW HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHH LRGLVPGSVSGSA HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]