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The map label for this gene is ndoR [H]

Identifier: 170746668

GI number: 170746668

Start: 230199

End: 231236

Strand: Reverse

Name: ndoR [H]

Synonym: Mrad2831_0219

Alternate gene names: 170746668

Gene position: 231236-230199 (Counterclockwise)

Preceding gene: 170746669

Following gene: 170746667

Centisome position: 3.8

GC content: 72.16

Gene sequence:

>1038_bases
ATGGCCGATCGCGTCGACCTCATCATCAACGGACGGCGCGTCAGCGCCGTCGCGGGACAGACCCTGCTCGACGCGGGTCT
GGCGGCCGGACGCGCGATCCCGCACGACTGCGCCACCGGTCAGTGCGACACCTGCCGCGTCCGGATCCATTCGGGCTCGG
TGGACGATGCGGGGACGCGCATCGGCGAGACCGTGCAGGCCTGCCGGGCGCGCCTGACCAGCGACACGGTCATCGAGTTC
GACGAGGTTCCCGAGACCGTCCGGCGCGCCGGCACTGTGGACCGCGTGGTCGATCTCACCGCCGAGATCGTCGAAGTCAC
GGTCGCGCTGCGCAAGCGGCTGATCTACCTGCCGGGCCAGTATGTCCGGGTCTCCTTCGCCGGGCTGCCGGCACGGGACT
ACAGCCCGACCCTGCGCTCGGATGGATCGGGCGAACTGAACGAGTTGATCTTCCAGATCCGCCGGCAGCCCGACGGCGCG
GTCTCGCCGCTGCTCGGCAACAAGGTCGGACCGGGAACCGCGGTGAAGGTCGAGGGTCCGTTCGGGGCCGCCTTCCACCG
GCTCGGACGCGGTCGCCTCGTCGTCGTCTCGTCCGGCGTCGGTTGGGCGCCGGCCTGGGCGGTCGCACGCGCGAGCCGGC
TGCGCGAGCCGGAGCGCGAGCTGCTCGTCGTGGCCGGCGCGCGGCACCCGCAGAACCTCTACATGCGCCCGGCGCTCGAC
TGGCTGCGCGAGCGCGGGGCAACGACGATCCTGACCTGCAGCGGCAGTAACCCACCTCCGGATGCCCGGGCGGGGCGACC
GACCCTCCACATGCCGATGCTCACGCGGGACGACACCGTCCTCGCGGCCGGCGCCCCGGAGATGGTCGCAGCGGTCCAAT
TCCTGGCCGCGGCCACCGGTGCGACCTGCTACGCCGATCCCTTCTACGCGGCCGCGCGCGGCGCGGAGGAGAACCCGCCG
TCCGACACGAATTTCCTGCAGCGCTTCCTGCAGCGCGTGGCGGGCCATCGGACCGCTAAAACGGAGCCCGTCGCCTAG

Upstream 100 bases:

>100_bases
CCTTCTACCTGTACGTCTCGGCCTTCGATCACACGCAGACCCGCCACACGCGGCACATGCGGCCGGTCGAAGTCCTGTTG
CGCTGAGGCGAGAGCGCGCC

Downstream 100 bases:

>100_bases
CAGATCGTCAACCACACCTTCAATGTACGGTATCCGGTGACCTCGAGTTAAGCACTCAAGGCGCATTCTCCGGTCATGGC
ACTGTCATTCTCGAATCTTC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MADRVDLIINGRRVSAVAGQTLLDAGLAAGRAIPHDCATGQCDTCRVRIHSGSVDDAGTRIGETVQACRARLTSDTVIEF
DEVPETVRRAGTVDRVVDLTAEIVEVTVALRKRLIYLPGQYVRVSFAGLPARDYSPTLRSDGSGELNELIFQIRRQPDGA
VSPLLGNKVGPGTAVKVEGPFGAAFHRLGRGRLVVVSSGVGWAPAWAVARASRLREPERELLVVAGARHPQNLYMRPALD
WLRERGATTILTCSGSNPPPDARAGRPTLHMPMLTRDDTVLAAGAPEMVAAVQFLAAATGATCYADPFYAAARGAEENPP
SDTNFLQRFLQRVAGHRTAKTEPVA

Sequences:

>Translated_345_residues
MADRVDLIINGRRVSAVAGQTLLDAGLAAGRAIPHDCATGQCDTCRVRIHSGSVDDAGTRIGETVQACRARLTSDTVIEF
DEVPETVRRAGTVDRVVDLTAEIVEVTVALRKRLIYLPGQYVRVSFAGLPARDYSPTLRSDGSGELNELIFQIRRQPDGA
VSPLLGNKVGPGTAVKVEGPFGAAFHRLGRGRLVVVSSGVGWAPAWAVARASRLREPERELLVVAGARHPQNLYMRPALD
WLRERGATTILTCSGSNPPPDARAGRPTLHMPMLTRDDTVLAAGAPEMVAAVQFLAAATGATCYADPFYAAARGAEENPP
SDTNFLQRFLQRVAGHRTAKTEPVA
>Mature_344_residues
ADRVDLIINGRRVSAVAGQTLLDAGLAAGRAIPHDCATGQCDTCRVRIHSGSVDDAGTRIGETVQACRARLTSDTVIEFD
EVPETVRRAGTVDRVVDLTAEIVEVTVALRKRLIYLPGQYVRVSFAGLPARDYSPTLRSDGSGELNELIFQIRRQPDGAV
SPLLGNKVGPGTAVKVEGPFGAAFHRLGRGRLVVVSSGVGWAPAWAVARASRLREPERELLVVAGARHPQNLYMRPALDW
LRERGATTILTCSGSNPPPDARAGRPTLHMPMLTRDDTVLAAGAPEMVAAVQFLAAATGATCYADPFYAAARGAEENPPS
DTNFLQRFLQRVAGHRTAKTEPVA

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36904; Mature: 36773

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRVDLIINGRRVSAVAGQTLLDAGLAAGRAIPHDCATGQCDTCRVRIHSGSVDDAGTR
CCCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
IGETVQACRARLTSDTVIEFDEVPETVRRAGTVDRVVDLTAEIVEVTVALRKRLIYLPGQ
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
YVRVSFAGLPARDYSPTLRSDGSGELNELIFQIRRQPDGAVSPLLGNKVGPGTAVKVEGP
EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEEECC
FGAAFHRLGRGRLVVVSSGVGWAPAWAVARASRLREPERELLVVAGARHPQNLYMRPALD
CHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHEEEEECCCCCCCCEEHHHHH
WLRERGATTILTCSGSNPPPDARAGRPTLHMPMLTRDDTVLAAGAPEMVAAVQFLAAATG
HHHHCCCEEEEEECCCCCCCCCCCCCCEEECCEEECCCEEEECCCHHHHHHHHHHHHHCC
ATCYADPFYAAARGAEENPPSDTNFLQRFLQRVAGHRTAKTEPVA
CCEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ADRVDLIINGRRVSAVAGQTLLDAGLAAGRAIPHDCATGQCDTCRVRIHSGSVDDAGTR
CCCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
IGETVQACRARLTSDTVIEFDEVPETVRRAGTVDRVVDLTAEIVEVTVALRKRLIYLPGQ
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC
YVRVSFAGLPARDYSPTLRSDGSGELNELIFQIRRQPDGAVSPLLGNKVGPGTAVKVEGP
EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEEECC
FGAAFHRLGRGRLVVVSSGVGWAPAWAVARASRLREPERELLVVAGARHPQNLYMRPALD
CHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHEEEEECCCCCCCCEEHHHHH
WLRERGATTILTCSGSNPPPDARAGRPTLHMPMLTRDDTVLAAGAPEMVAAVQFLAAATG
HHHHCCCEEEEEECCCCCCCCCCCCCCEEECCEEECCCEEEECCCHHHHHHHHHHHHHCC
ATCYADPFYAAARGAEENPPSDTNFLQRFLQRVAGHRTAKTEPVA
CCEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]