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The map label for this gene is ybeQ [H]

Identifier: 170746604

GI number: 170746604

Start: 154020

End: 155072

Strand: Reverse

Name: ybeQ [H]

Synonym: Mrad2831_0154

Alternate gene names: 170746604

Gene position: 155072-154020 (Counterclockwise)

Preceding gene: 170746605

Following gene: 170746600

Centisome position: 2.55

GC content: 73.31

Gene sequence:

>1053_bases
GTGAGAGGCCGCGACGTCCGTCGTCTGGCGGCCTTCGCCGGCGCGGCGCTGCTGGCGCTGCCGGCCTGGGCGGCCTCGGG
ACCGGCCGATCCGGCCCGGACCGCGGCGCCCGGCGCGATCGGCCCCGCGGCGCAGACCGGCAAGACGCCGATGCCGGAAC
TGCCGAGCCCCTACACGCCGAACTACTCGCGCGGCGCCGTGCCGCCGGCGGGCGGCCAGCCACCGGACTTTGCCTACGGC
GCCTATCAGAAGGGCCAGTACGTCACCGCCTTCCGCGAGGCGACGAAGCGCATCGAGGCGAATCCGAAGGATGCCGCCGC
CATGACGCTGCTCGGCGAGCTGTACAATCAGGGCCTCGGAGTGAAGCAGGATCCGGTCAAGGCGGCCGACTGGTATCGCT
TGGCGGCCGCGCAGAACGACGCGTCCGCCATGGCCTCCCTGGGGCTGATGGCCCTCGACGGTCGCGGCATGCCGAAGGAC
CCGAAGGCCGGGCGGCGCTGGCTCGAGCAGGCCACGGCCCACGGCTCACCGACCGCGGCCTACAATCTCGGCCTGATCCT
GATCGGCACCGGCGCCACGGCCGACGAGGCGGCGGCCGCCGCGCAGTTCCGCAAGGCGTCAGACGCCGAGATCGGCCCGG
CCCAGCACGACCTGGGCGTGCTCTACCTGCAGGGGCGCGGCGTGCCGAAGGATCCGTCGAAGGCCGCGGAGCTGTTCCGG
CGCGGCGCCGACAACGGCGATCTCGCCAGCGAGGTCGAGTACGCGATCCTTCTCTTCAACGGCACCGGCGTCACCAAGGA
CGAGCGTGCGGCCGCCCGGTACTTCCTGCACGCGGCCTCGCGCGGCAACGCCATCGCGCAAAACCGCGTCGCGCGGCTGT
ACGCGGTGGGCCGCGGCGTTGCCAAGAATTCCGTGGAGGCGGCCGCCTGGAACCTGGCGGCCGCCGGACAGGGCCTGTCC
GACGCGTGGCTCGATCAGACCCTCTCCGGTCTCTCGGCCGACGAGCGCACCCGGGCGGAGCGTCTCGCCAACGAGCGGAT
CGAGCAGCGCTGA

Upstream 100 bases:

>100_bases
CCGCGACGGGTGCCGAGTTCGTCGGCCTGGAGAGCGGCCTCTGGCTGCCGGATCCGGGCGCGGTCGAGCGGGCCCAGCGC
GCCGTCCGGGAGTCCGAGGC

Downstream 100 bases:

>100_bases
GACGCTAGGCCTCGGCCTTCGACCAGTCGACGCCCGCCTCGAGGTGCGGCAGCAGGACGACGCTCTCCTGCTCGTTCGGG
TCCGTCCGGGCGATCACGGC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MRGRDVRRLAAFAGAALLALPAWAASGPADPARTAAPGAIGPAAQTGKTPMPELPSPYTPNYSRGAVPPAGGQPPDFAYG
AYQKGQYVTAFREATKRIEANPKDAAAMTLLGELYNQGLGVKQDPVKAADWYRLAAAQNDASAMASLGLMALDGRGMPKD
PKAGRRWLEQATAHGSPTAAYNLGLILIGTGATADEAAAAAQFRKASDAEIGPAQHDLGVLYLQGRGVPKDPSKAAELFR
RGADNGDLASEVEYAILLFNGTGVTKDERAAARYFLHAASRGNAIAQNRVARLYAVGRGVAKNSVEAAAWNLAAAGQGLS
DAWLDQTLSGLSADERTRAERLANERIEQR

Sequences:

>Translated_350_residues
MRGRDVRRLAAFAGAALLALPAWAASGPADPARTAAPGAIGPAAQTGKTPMPELPSPYTPNYSRGAVPPAGGQPPDFAYG
AYQKGQYVTAFREATKRIEANPKDAAAMTLLGELYNQGLGVKQDPVKAADWYRLAAAQNDASAMASLGLMALDGRGMPKD
PKAGRRWLEQATAHGSPTAAYNLGLILIGTGATADEAAAAAQFRKASDAEIGPAQHDLGVLYLQGRGVPKDPSKAAELFR
RGADNGDLASEVEYAILLFNGTGVTKDERAAARYFLHAASRGNAIAQNRVARLYAVGRGVAKNSVEAAAWNLAAAGQGLS
DAWLDQTLSGLSADERTRAERLANERIEQR
>Mature_350_residues
MRGRDVRRLAAFAGAALLALPAWAASGPADPARTAAPGAIGPAAQTGKTPMPELPSPYTPNYSRGAVPPAGGQPPDFAYG
AYQKGQYVTAFREATKRIEANPKDAAAMTLLGELYNQGLGVKQDPVKAADWYRLAAAQNDASAMASLGLMALDGRGMPKD
PKAGRRWLEQATAHGSPTAAYNLGLILIGTGATADEAAAAAQFRKASDAEIGPAQHDLGVLYLQGRGVPKDPSKAAELFR
RGADNGDLASEVEYAILLFNGTGVTKDERAAARYFLHAASRGNAIAQNRVARLYAVGRGVAKNSVEAAAWNLAAAGQGLS
DAWLDQTLSGLSADERTRAERLANERIEQR

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=177, Percent_Identity=29.3785310734463, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI19923669, Length=186, Percent_Identity=29.5698924731183, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI87081769, Length=220, Percent_Identity=31.3636363636364, Blast_Score=93, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17563256, Length=221, Percent_Identity=27.6018099547511, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355295, Length=216, Percent_Identity=29.6296296296296, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 36635; Mature: 36635

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRDVRRLAAFAGAALLALPAWAASGPADPARTAAPGAIGPAAQTGKTPMPELPSPYTP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NYSRGAVPPAGGQPPDFAYGAYQKGQYVTAFREATKRIEANPKDAAAMTLLGELYNQGLG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
VKQDPVKAADWYRLAAAQNDASAMASLGLMALDGRGMPKDPKAGRRWLEQATAHGSPTAA
CCCCCCCHHHHHHHHHCCCHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE
YNLGLILIGTGATADEAAAAAQFRKASDAEIGPAQHDLGVLYLQGRGVPKDPSKAAELFR
EECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
RGADNGDLASEVEYAILLFNGTGVTKDERAAARYFLHAASRGNAIAQNRVARLYAVGRGV
CCCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
AKNSVEAAAWNLAAAGQGLSDAWLDQTLSGLSADERTRAERLANERIEQR
HHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGRDVRRLAAFAGAALLALPAWAASGPADPARTAAPGAIGPAAQTGKTPMPELPSPYTP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NYSRGAVPPAGGQPPDFAYGAYQKGQYVTAFREATKRIEANPKDAAAMTLLGELYNQGLG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
VKQDPVKAADWYRLAAAQNDASAMASLGLMALDGRGMPKDPKAGRRWLEQATAHGSPTAA
CCCCCCCHHHHHHHHHCCCHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE
YNLGLILIGTGATADEAAAAAQFRKASDAEIGPAQHDLGVLYLQGRGVPKDPSKAAELFR
EECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
RGADNGDLASEVEYAILLFNGTGVTKDERAAARYFLHAASRGNAIAQNRVARLYAVGRGV
CCCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCH
AKNSVEAAAWNLAAAGQGLSDAWLDQTLSGLSADERTRAERLANERIEQR
HHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]