| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170746541
Identifier: 170746541
GI number: 170746541
Start: 98579
End: 99592
Strand: Reverse
Name: 170746541
Synonym: Mrad2831_0091
Alternate gene names: NA
Gene position: 99592-98579 (Counterclockwise)
Preceding gene: 170746542
Following gene: 170746540
Centisome position: 1.64
GC content: 73.77
Gene sequence:
>1014_bases ATGAGCAGCCCCGTCAGCAACCCGTCCCTCACCAGTCACGTCGCCGCGCTGGAGCCCGGCGAGCACGTGCTCGCCGCGCA CTTCCTCAAGGACGTGCCGGCCCTGGCGCTCAGCGACGGCACGGTCGCGCTGGTGCGGGCGGACGGGATCGCGCGCGTCG CCGCGCATCCCGACAGCGGGATCCTCGTCACGGCCGGCGGTGTCGACCGGCTGGTCACGGGGGGCGACGACGGGCGCGTG GTGGCGATCCGCGCCGACGGGGGGATGGAGCAGCTCGGCCTCGCCAAGGGCGGTGCCTGGATCGACGCGCTGGCGGTCCA TCCCGACGGTGGCGTGGCGTGGTCGGCCGGCCGCTCCGTCGTGGCCCGGGACGCCAAGGGCCGCGAGAAGACCTTCGAGG CGCCGTCCTCCGCGCGCGGCCTCGTCTTCGCGCCCAAGGGGTACCGGCTGGGTGTCGCCCACTACAACGGCGTGAGCCTC TGGTACCCCAATCTGGAGACGCCCGCCGAGGTGGTCACCTGGAAGGGCTCGCATATCGACGTGACGTGGTCGCCGGACGG GCGCTTCGTGGTGTCGACCATGCAGGAGAACAGCCTGCACGGCTGGCGCCTGCAGCCGGACCGCGGCCACATGCGGATGT CGGGCTATCCCGGCAAGGTCCGCTCCATGTCGTGGTCGTTCGACGGCAACTGGCTCGCCACGAGCGGGGCCGAGGCGGCG ATCGTGTGGCCGTTCGACTCCAAGGAGGGGCCGACCGGCAAGGCGCCGCGCGAATGCGGCGTCCGCCCCGCCCGCGTCTC CCGCGTGGCTTTCCACCCGAAGGCGCCGGTGCTGGCCATGGGCTACGAGGACGGCTGCATCCTGCTCGTCCGCTTCACCG ACGCGGCCGAGCTGCTGGTGCGCCCCGCCGTCCAGGGAAGCGGCGTGACGGCGCTCGGCTGGGACGCGCGCGGCGGCCGG CTGCTGTTCGGCTGCACCGACGGCAAGGCCGGCCTCCTGACGCTGCCGGGCTGA
Upstream 100 bases:
>100_bases ACGCGCTGATCGCCCCGGCGGCGATCTCGGGCGGGCTGGCGTTGATTACCGCGTTCCTGGTCTTGCGCACCGCGCCGCCG GCCGCGAAGGTCCCCCCGAC
Downstream 100 bases:
>100_bases CCACGGAGGCGAGCGTCGTCGCGCCCGCGGCTGGAACCGGGGCCCCGTGCGTGCTCTTTGTCGGGGGTCGATTTCCCGCC GGAGGCCAGACATGTTTCGC
Product: WD-40 repeat-containing protein
Products: NA
Alternate protein names: WD-40 Repeat Protein; WD-40 Repeat-Containing G-Protein; WD Repeat-Containing Protein; WD-Repeat Family Protein; G- Repeat Protein; WD40 Domain-Containing Protein; Beta WD-40 Repeat-Containing G-Protein; WD40 Repeat Subgroup; Vegetatible Incompatibility; Wd-40 Repeat Protein; WD40-Like Beta-Propeller Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSSPVSNPSLTSHVAALEPGEHVLAAHFLKDVPALALSDGTVALVRADGIARVAAHPDSGILVTAGGVDRLVTGGDDGRV VAIRADGGMEQLGLAKGGAWIDALAVHPDGGVAWSAGRSVVARDAKGREKTFEAPSSARGLVFAPKGYRLGVAHYNGVSL WYPNLETPAEVVTWKGSHIDVTWSPDGRFVVSTMQENSLHGWRLQPDRGHMRMSGYPGKVRSMSWSFDGNWLATSGAEAA IVWPFDSKEGPTGKAPRECGVRPARVSRVAFHPKAPVLAMGYEDGCILLVRFTDAAELLVRPAVQGSGVTALGWDARGGR LLFGCTDGKAGLLTLPG
Sequences:
>Translated_337_residues MSSPVSNPSLTSHVAALEPGEHVLAAHFLKDVPALALSDGTVALVRADGIARVAAHPDSGILVTAGGVDRLVTGGDDGRV VAIRADGGMEQLGLAKGGAWIDALAVHPDGGVAWSAGRSVVARDAKGREKTFEAPSSARGLVFAPKGYRLGVAHYNGVSL WYPNLETPAEVVTWKGSHIDVTWSPDGRFVVSTMQENSLHGWRLQPDRGHMRMSGYPGKVRSMSWSFDGNWLATSGAEAA IVWPFDSKEGPTGKAPRECGVRPARVSRVAFHPKAPVLAMGYEDGCILLVRFTDAAELLVRPAVQGSGVTALGWDARGGR LLFGCTDGKAGLLTLPG >Mature_336_residues SSPVSNPSLTSHVAALEPGEHVLAAHFLKDVPALALSDGTVALVRADGIARVAAHPDSGILVTAGGVDRLVTGGDDGRVV AIRADGGMEQLGLAKGGAWIDALAVHPDGGVAWSAGRSVVARDAKGREKTFEAPSSARGLVFAPKGYRLGVAHYNGVSLW YPNLETPAEVVTWKGSHIDVTWSPDGRFVVSTMQENSLHGWRLQPDRGHMRMSGYPGKVRSMSWSFDGNWLATSGAEAAI VWPFDSKEGPTGKAPRECGVRPARVSRVAFHPKAPVLAMGYEDGCILLVRFTDAAELLVRPAVQGSGVTALGWDARGGRL LFGCTDGKAGLLTLPG
Specific function: Unknown
COG id: COG2319
COG function: function code R; FOG: WD40 repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35385; Mature: 35253
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS01070 NUCLEASE_NON_SPEC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPVSNPSLTSHVAALEPGEHVLAAHFLKDVPALALSDGTVALVRADGIARVAAHPDSG CCCCCCCCCHHHEEEECCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEEECCCCC ILVTAGGVDRLVTGGDDGRVVAIRADGGMEQLGLAKGGAWIDALAVHPDGGVAWSAGRSV EEEEECCCCEEEECCCCCEEEEEECCCCHHHHEECCCCCEEEEEEECCCCCEEECCCCEE VARDAKGREKTFEAPSSARGLVFAPKGYRLGVAHYNGVSLWYPNLETPAEVVTWKGSHID EEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCEEEEECCCCCCCCEEEECCCEEE VTWSPDGRFVVSTMQENSLHGWRLQPDRGHMRMSGYPGKVRSMSWSFDGNWLATSGAEAA EEECCCCCEEEEEECCCCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCEEEECCCCEE IVWPFDSKEGPTGKAPRECGVRPARVSRVAFHPKAPVLAMGYEDGCILLVRFTDAAELLV EEEECCCCCCCCCCCCHHHCCCCHHEEEEEECCCCCEEEEECCCCEEEEEEECCCHHHHE RPAVQGSGVTALGWDARGGRLLFGCTDGKAGLLTLPG ECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCC >Mature Secondary Structure SSPVSNPSLTSHVAALEPGEHVLAAHFLKDVPALALSDGTVALVRADGIARVAAHPDSG CCCCCCCCHHHEEEECCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCEEEEEECCCCC ILVTAGGVDRLVTGGDDGRVVAIRADGGMEQLGLAKGGAWIDALAVHPDGGVAWSAGRSV EEEEECCCCEEEECCCCCEEEEEECCCCHHHHEECCCCCEEEEEEECCCCCEEECCCCEE VARDAKGREKTFEAPSSARGLVFAPKGYRLGVAHYNGVSLWYPNLETPAEVVTWKGSHID EEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCEEEEECCCCCCCCEEEECCCEEE VTWSPDGRFVVSTMQENSLHGWRLQPDRGHMRMSGYPGKVRSMSWSFDGNWLATSGAEAA EEECCCCCEEEEEECCCCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCEEEECCCCEE IVWPFDSKEGPTGKAPRECGVRPARVSRVAFHPKAPVLAMGYEDGCILLVRFTDAAELLV EEEECCCCCCCCCCCCHHHCCCCHHEEEEEECCCCCEEEEECCCCEEEEEEECCCHHHHE RPAVQGSGVTALGWDARGGRLLFGCTDGKAGLLTLPG ECCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA