| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170746539
Identifier: 170746539
GI number: 170746539
Start: 96618
End: 97856
Strand: Reverse
Name: 170746539
Synonym: Mrad2831_0089
Alternate gene names: NA
Gene position: 97856-96618 (Counterclockwise)
Preceding gene: 170746540
Following gene: 170746536
Centisome position: 1.61
GC content: 73.93
Gene sequence:
>1239_bases ATGCCGCGCGCGTCGAACTCCACCACCATCGATCCGGCGCTCGACGCCGCCGCGCTGCTGCGGCGTATCGGCTTATTCGG CCTGTTCGTGGTTCTCCCGGTCCTGGCGCAGGTCGCGCGCCGCGCCTCGGTGATCCTCGCGCCGATCGCCGTGATCCTCC TGATCATCGCCAGCGTCATCGACCGGCGGCAGCGCCCGGTCCGCCCGGCGACCTCCCGTCTCCTGACCGCTCCGGCCTTC CTGGCCGGCATGCTGGTCGTGCTGTGGTCGGCCCTGTCGCTCACCTGGACGCCCTTCCTCGGGCCCGCGCTGGAGCGGCT CGCCAATCTCGGCGCAACGATCGGCCTCGCCCTCCTGGGCTACCTCGCCCTCCCCGACCGGATGCGCTCGGCGAATCTCT ACCTCCTGCCACTCGGCGTCGTGGCGGGGGCGATCGTGGCGATCATGCTCGGGCTGTTCGGCGCCCACCTCGCGCCGTCC GGCGTCGAGGATGACGGCGCGCTGGATCGCGGCCTTGTCCTGCTCATCCTGCTGCTCTGGCCGGCCCTCGCGTGGCTGCG ATCCCGCCGCCGCGACCGGGAGGCGCTGGGCCTCGCGCTGCTGGTCGCCCTCGCCCTCACGGTCCAGCCGGACGGGACCC AGATCGCCGCCCTGTCGGTCGGCGCCGTCGCCTTCGCGCTGACGAGCTACCGCCAGGGGCTCGGCGTGATGCTCACCGCC ACCCTCTCGGCCGCCCTGCTGGCCGCGGCGCCGCTGCTGCCCTTCCTGGCGCGGCCGGTGGGGGCCGCGCTGCTCGGGCC GGTCGCCCCCGCGGTGCTGTCGCTGAAGAGCTGGCAGAAGGTCGTGACCTCCGATCCGGTGCGGCTGATCACCGGGCACG GCTTCGAGACGGCCCTGCGCGGACGGCTGGTCGGCCTGCTGCCGGCCAACGCGCCGACCACGGCGCTCTTCGAGTTCTGG TACGAGCTCGGCATCGTCGGCGCGCTCGCCGCCGCTTTCGCCCTCTACGCCTCGATCCGGCGGGCCGGCCGGGACGGCCC GGCCCTGGTGCCCGGCGCGATGGGCTGCTTCGCGGCCGCCTTCACGGTGGCCTGCCTGAGCGTGGGGCTGACCGCGGTGT GGTGGCTGACCACCATCGCCATCGCCATCGTGGTCTTCGTCGCGGTGGAGCGCGGCCAGTTCCGGACCAGTCGGCCGAAG GTCGCCAAGCTGCACCGCCTGCAGACGCGCGGGGAGTGA
Upstream 100 bases:
>100_bases TTCGCGCGGGCAAGACTGTGGCGCAACGTCTACAGCGGCTTGCGCGAGCCTTGCGTATCGAGCAGGGATCCGGCCGTCCC GGTCCGGGAGAAGGCGCAAG
Downstream 100 bases:
>100_bases GCGGTCAGGCGCGCAGGAAGCCGTGCAGGCGGATCCAGGCCAGGAACAGGCCGGGCCACGCCGCCGCGGGTGTGCCGGGC GCGCCGAGGCCGAAGCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPRASNSTTIDPALDAAALLRRIGLFGLFVVLPVLAQVARRASVILAPIAVILLIIASVIDRRQRPVRPATSRLLTAPAF LAGMLVVLWSALSLTWTPFLGPALERLANLGATIGLALLGYLALPDRMRSANLYLLPLGVVAGAIVAIMLGLFGAHLAPS GVEDDGALDRGLVLLILLLWPALAWLRSRRRDREALGLALLVALALTVQPDGTQIAALSVGAVAFALTSYRQGLGVMLTA TLSAALLAAAPLLPFLARPVGAALLGPVAPAVLSLKSWQKVVTSDPVRLITGHGFETALRGRLVGLLPANAPTTALFEFW YELGIVGALAAAFALYASIRRAGRDGPALVPGAMGCFAAAFTVACLSVGLTAVWWLTTIAIAIVVFVAVERGQFRTSRPK VAKLHRLQTRGE
Sequences:
>Translated_412_residues MPRASNSTTIDPALDAAALLRRIGLFGLFVVLPVLAQVARRASVILAPIAVILLIIASVIDRRQRPVRPATSRLLTAPAF LAGMLVVLWSALSLTWTPFLGPALERLANLGATIGLALLGYLALPDRMRSANLYLLPLGVVAGAIVAIMLGLFGAHLAPS GVEDDGALDRGLVLLILLLWPALAWLRSRRRDREALGLALLVALALTVQPDGTQIAALSVGAVAFALTSYRQGLGVMLTA TLSAALLAAAPLLPFLARPVGAALLGPVAPAVLSLKSWQKVVTSDPVRLITGHGFETALRGRLVGLLPANAPTTALFEFW YELGIVGALAAAFALYASIRRAGRDGPALVPGAMGCFAAAFTVACLSVGLTAVWWLTTIAIAIVVFVAVERGQFRTSRPK VAKLHRLQTRGE >Mature_411_residues PRASNSTTIDPALDAAALLRRIGLFGLFVVLPVLAQVARRASVILAPIAVILLIIASVIDRRQRPVRPATSRLLTAPAFL AGMLVVLWSALSLTWTPFLGPALERLANLGATIGLALLGYLALPDRMRSANLYLLPLGVVAGAIVAIMLGLFGAHLAPSG VEDDGALDRGLVLLILLLWPALAWLRSRRRDREALGLALLVALALTVQPDGTQIAALSVGAVAFALTSYRQGLGVMLTAT LSAALLAAAPLLPFLARPVGAALLGPVAPAVLSLKSWQKVVTSDPVRLITGHGFETALRGRLVGLLPANAPTTALFEFWY ELGIVGALAAAFALYASIRRAGRDGPALVPGAMGCFAAAFTVACLSVGLTAVWWLTTIAIAIVVFVAVERGQFRTSRPKV AKLHRLQTRGE
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43224; Mature: 43093
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRASNSTTIDPALDAAALLRRIGLFGLFVVLPVLAQVARRASVILAPIAVILLIIASVI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRRQRPVRPATSRLLTAPAFLAGMLVVLWSALSLTWTPFLGPALERLANLGATIGLALLG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH YLALPDRMRSANLYLLPLGVVAGAIVAIMLGLFGAHLAPSGVEDDGALDRGLVLLILLLW HHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH PALAWLRSRRRDREALGLALLVALALTVQPDGTQIAALSVGAVAFALTSYRQGLGVMLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHH TLSAALLAAAPLLPFLARPVGAALLGPVAPAVLSLKSWQKVVTSDPVRLITGHGFETALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH GRLVGLLPANAPTTALFEFWYELGIVGALAAAFALYASIRRAGRDGPALVPGAMGCFAAA HHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH FTVACLSVGLTAVWWLTTIAIAIVVFVAVERGQFRTSRPKVAKLHRLQTRGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure PRASNSTTIDPALDAAALLRRIGLFGLFVVLPVLAQVARRASVILAPIAVILLIIASVI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRRQRPVRPATSRLLTAPAFLAGMLVVLWSALSLTWTPFLGPALERLANLGATIGLALLG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH YLALPDRMRSANLYLLPLGVVAGAIVAIMLGLFGAHLAPSGVEDDGALDRGLVLLILLLW HHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH PALAWLRSRRRDREALGLALLVALALTVQPDGTQIAALSVGAVAFALTSYRQGLGVMLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHH TLSAALLAAAPLLPFLARPVGAALLGPVAPAVLSLKSWQKVVTSDPVRLITGHGFETALR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH GRLVGLLPANAPTTALFEFWYELGIVGALAAAFALYASIRRAGRDGPALVPGAMGCFAAA HHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH FTVACLSVGLTAVWWLTTIAIAIVVFVAVERGQFRTSRPKVAKLHRLQTRGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA