Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
---|---|
Accession | NC_010505 |
Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is ctaE [H]
Identifier: 170746478
GI number: 170746478
Start: 30083
End: 30946
Strand: Reverse
Name: ctaE [H]
Synonym: Mrad2831_0028
Alternate gene names: 170746478
Gene position: 30946-30083 (Counterclockwise)
Preceding gene: 170746479
Following gene: 170746477
Centisome position: 0.51
GC content: 64.58
Gene sequence:
>864_bases ATGGCCGAGGCGCACGCCAAGAATCACGACTTTCACATCCTGAATCCGAGCCCGTGGCCGTTGCTCGGGGCCTTCTCGGG CTTCCTCATGGCGTTCGGCGCTGTGTTCTGGATGAAGAGCCTCCAGATCGGCACCCTGAGCCCGGGACCCTACATCTTCG GGGCCGGCACGATCGGCGTTCTCTACACCATGTACGCGTGGTGGAAGGACGTCGCGCACGAGGCCAATTCCGGCGACCAT ACCCGCGTCGTGCAGTTGCACCACCGCTACGGCATGATGATGTTCATCGCCTCCGAGGTGATGTTCTTCGTCGCGTGGTT CTGGGCCTACTTCGAGGCCGCCCTCTACACCGCCGACCCGATCCAGGTCTCGCGCGTGGAGTTCACCGGCGGTGTCTGGC CGCCGAAAGGCATCGAGGCGTTCGATCCCTGGCACCTGCCGCTCCTCAACACGCTGATCCTGCTGACCTCGGGCACCACC GTGACCTGGGCGCACCACGCGCTGATCGAGGGCGACCGCAAGGGCCTGAAGTACGGCCTGTGGCTGACCATCATCCTCGG CGTCCTGTTCACCGCCTGCCAAGCCTACGAGTACAGCCACGCCGAATTCGGCTTCTCGGGCAGCATCTACTCGTCGACCT TCTTCATGGCGACGGGCTTCCACGGCGCCCACGTGATCATCGGCACGATCTTCCTGGCAGTGTGCCTGTTCCGCGCCTAC GCGGGCCAGTTCACGCCCCGTCAGCACCTCGGCTTCGAGTTCGCCGCCTGGTACTGGCACTTCGTCGATGTCGTGTGGCT GTTCCTGTTCGCCGCCATCTACGTGTGGGGCTCCGGCGTGTTCCACGGTGGCGGCGCTCACTGA
Upstream 100 bases:
>100_bases AAGCTTGGGTGTGGTGCGTGCCGCGCCCGGCCAAGAGCAAGCAACGAACAGCGTAAGGCCGGGAACGGCGCAGGGCGCGA GGGTGAGGAGCGACGGGACG
Downstream 100 bases:
>100_bases GCGGAACCATCTCGCCGCTGCATGGCGGACCTGCGAAGGGCGGCTCAGGCCGCCCTTCTGCATTTCCGACGCCGCGCGAT CCCCATATCGAGGGGGCGGC
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAEAHAKNHDFHILNPSPWPLLGAFSGFLMAFGAVFWMKSLQIGTLSPGPYIFGAGTIGVLYTMYAWWKDVAHEANSGDH TRVVQLHHRYGMMMFIASEVMFFVAWFWAYFEAALYTADPIQVSRVEFTGGVWPPKGIEAFDPWHLPLLNTLILLTSGTT VTWAHHALIEGDRKGLKYGLWLTIILGVLFTACQAYEYSHAEFGFSGSIYSSTFFMATGFHGAHVIIGTIFLAVCLFRAY AGQFTPRQHLGFEFAAWYWHFVDVVWLFLFAAIYVWGSGVFHGGGAH
Sequences:
>Translated_287_residues MAEAHAKNHDFHILNPSPWPLLGAFSGFLMAFGAVFWMKSLQIGTLSPGPYIFGAGTIGVLYTMYAWWKDVAHEANSGDH TRVVQLHHRYGMMMFIASEVMFFVAWFWAYFEAALYTADPIQVSRVEFTGGVWPPKGIEAFDPWHLPLLNTLILLTSGTT VTWAHHALIEGDRKGLKYGLWLTIILGVLFTACQAYEYSHAEFGFSGSIYSSTFFMATGFHGAHVIIGTIFLAVCLFRAY AGQFTPRQHLGFEFAAWYWHFVDVVWLFLFAAIYVWGSGVFHGGGAH >Mature_286_residues AEAHAKNHDFHILNPSPWPLLGAFSGFLMAFGAVFWMKSLQIGTLSPGPYIFGAGTIGVLYTMYAWWKDVAHEANSGDHT RVVQLHHRYGMMMFIASEVMFFVAWFWAYFEAALYTADPIQVSRVEFTGGVWPPKGIEAFDPWHLPLLNTLILLTSGTTV TWAHHALIEGDRKGLKYGLWLTIILGVLFTACQAYEYSHAEFGFSGSIYSSTFFMATGFHGAHVIIGTIFLAVCLFRAYA GQFTPRQHLGFEFAAWYWHFVDVVWLFLFAAIYVWGSGVFHGGGAH
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=273, Percent_Identity=47.6190476190476, Blast_Score=225, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6226542, Length=278, Percent_Identity=37.7697841726619, Blast_Score=176, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32242; Mature: 32111
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAHAKNHDFHILNPSPWPLLGAFSGFLMAFGAVFWMKSLQIGTLSPGPYIFGAGTIGV CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH LYTMYAWWKDVAHEANSGDHTRVVQLHHRYGMMMFIASEVMFFVAWFWAYFEAALYTADP HHHHHHHHHHHHHCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IQVSRVEFTGGVWPPKGIEAFDPWHLPLLNTLILLTSGTTVTWAHHALIEGDRKGLKYGL CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHHH WLTIILGVLFTACQAYEYSHAEFGFSGSIYSSTFFMATGFHGAHVIIGTIFLAVCLFRAY HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHH AGQFTPRQHLGFEFAAWYWHFVDVVWLFLFAAIYVWGSGVFHGGGAH HCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AEAHAKNHDFHILNPSPWPLLGAFSGFLMAFGAVFWMKSLQIGTLSPGPYIFGAGTIGV CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH LYTMYAWWKDVAHEANSGDHTRVVQLHHRYGMMMFIASEVMFFVAWFWAYFEAALYTADP HHHHHHHHHHHHHCCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IQVSRVEFTGGVWPPKGIEAFDPWHLPLLNTLILLTSGTTVTWAHHALIEGDRKGLKYGL CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHHH WLTIILGVLFTACQAYEYSHAEFGFSGSIYSSTFFMATGFHGAHVIIGTIFLAVCLFRAY HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHH AGQFTPRQHLGFEFAAWYWHFVDVVWLFLFAAIYVWGSGVFHGGGAH HCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]