Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762447
Identifier: 170762447
GI number: 170762447
Start: 192830
End: 193519
Strand: Direct
Name: 170762447
Synonym: UPA3_0163
Alternate gene names: NA
Gene position: 192830-193519 (Clockwise)
Preceding gene: 170762086
Following gene: 170762327
Centisome position: 25.65
GC content: 24.64
Gene sequence:
>690_bases ATGAGTTCTAATAACTTTGATAATAATATGCCACGTATTGAATTTAAAAAAATGCCACTAACTTTTATTAGATTAAATAC GAAAAAAAGTAATAACGCACCCTTTGTTTCAGGTAGTTTTTGATTAGCAGATAAAGTAAATGCGAACGTTTATTTTAGTG AATATTTAATGGAACGTATTGTTCCATTTGAAAACAATAAAACTAATATCGTTATCTTAGAAAATGTTTCATGTTATATA AATTTTAACTGAGAAGAAAAACGAATTATTATGCGTGTTGTTTCATTTGATAATATTTTTTACAAGCATCAATTAAGCGA ACAACAAACTATTGATTTTGTGAGTGCTGAAAAAGAATATAACTATCAAACACAAACAGTTAATTCTTATAGTAATAGTG ATGATGAAATTGAAATTATTAACTGATTAGAAAGTGATGAACAAAAAGCATATTTTGATAGTCAGTTAATGTTTATTGAT TATAAAAACCAAGGCTTTTTTAAAAATAAAACAATGCCAGATAAACTAAAAAATAACGCTAATGCTTTAGAACTTTATAA ACAAATTATTAAATTAGATTTAGAAGCATTTAGTGGTTTATACAACGGCTTAAAACCATTTGAAGCAGCAAATAAATTAA TTGAAAAAGGCTATATAACACTTAACGATTTCTTTAAATATGCGATCTAA
Upstream 100 bases:
>100_bases ATGCAACAAGGCGAAGCAGTGCCAAATAAAAAAATGTTTACACCACCAGTTGCTGAAGTAATTGAACCAGCAGTTGAAAA TATAAAGAAAGTAGATTTTA
Downstream 100 bases:
>100_bases ACAATGACATTTGAGCACACAAGATGCTAATTTAGCAAATAAAAAATATGATTATATTTACTTTAGGGGTGTTAATCAAC TTTATTTAAAACGTCTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSSNNFDNNMPRIEFKKMPLTFIRLNTKKSNNAPFVSGSFWLADKVNANVYFSEYLMERIVPFENNKTNIVILENVSCYI NFNWEEKRIIMRVVSFDNIFYKHQLSEQQTIDFVSAEKEYNYQTQTVNSYSNSDDEIEIINWLESDEQKAYFDSQLMFID YKNQGFFKNKTMPDKLKNNANALELYKQIIKLDLEAFSGLYNGLKPFEAANKLIEKGYITLNDFFKYAI
Sequences:
>Translated_229_residues MSSNNFDNNMPRIEFKKMPLTFIRLNTKKSNNAPFVSGSF*LADKVNANVYFSEYLMERIVPFENNKTNIVILENVSCYI NFN*EEKRIIMRVVSFDNIFYKHQLSEQQTIDFVSAEKEYNYQTQTVNSYSNSDDEIEIIN*LESDEQKAYFDSQLMFID YKNQGFFKNKTMPDKLKNNANALELYKQIIKLDLEAFSGLYNGLKPFEAANKLIEKGYITLNDFFKYAI >Mature_228_residues SSNNFDNNMPRIEFKKMPLTFIRLNTKKSNNAPFVSGSF*LADKVNANVYFSEYLMERIVPFENNKTNIVILENVSCYIN FN*EEKRIIMRVVSFDNIFYKHQLSEQQTIDFVSAEKEYNYQTQTVNSYSNSDDEIEIIN*LESDEQKAYFDSQLMFIDY KNQGFFKNKTMPDKLKNNANALELYKQIIKLDLEAFSGLYNGLKPFEAANKLIEKGYITLNDFFKYAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26483; Mature: 26352
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNNFDNNMPRIEFKKMPLTFIRLNTKKSNNAPFVSGSFLADKVNANVYFSEYLMERIV CCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEECCCEEECCCCCEEHHHHHHHHCC PFENNKTNIVILENVSCYINFNEEKRIIMRVVSFDNIFYKHQLSEQQTIDFVSAEKEYNY CCCCCCEEEEEEECEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCC QTQTVNSYSNSDDEIEIINLESDEQKAYFDSQLMFIDYKNQGFFKNKTMPDKLKNNANAL EEEEECCCCCCCCCEEEEECCCCCCHHEECCEEEEEEECCCCEECCCCCCHHHHCCCHHH ELYKQIIKLDLEAFSGLYNGLKPFEAANKLIEKGYITLNDFFKYAI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHCC >Mature Secondary Structure SSNNFDNNMPRIEFKKMPLTFIRLNTKKSNNAPFVSGSFLADKVNANVYFSEYLMERIV CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEECCCEEECCCCCEEHHHHHHHHCC PFENNKTNIVILENVSCYINFNEEKRIIMRVVSFDNIFYKHQLSEQQTIDFVSAEKEYNY CCCCCCEEEEEEECEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCC QTQTVNSYSNSDDEIEIINLESDEQKAYFDSQLMFIDYKNQGFFKNKTMPDKLKNNANAL EEEEECCCCCCCCCEEEEECCCCCCHHEECCEEEEEEECCCCEECCCCCCHHHHCCCHHH ELYKQIIKLDLEAFSGLYNGLKPFEAANKLIEKGYITLNDFFKYAI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]