Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762442
Identifier: 170762442
GI number: 170762442
Start: 24201
End: 25601
Strand: Reverse
Name: 170762442
Synonym: UPA3_0024
Alternate gene names: NA
Gene position: 25601-24201 (Counterclockwise)
Preceding gene: 170761943
Following gene: 170762226
Centisome position: 3.41
GC content: 23.7
Gene sequence:
>1401_bases ATGAAAATTAGTTTTAAATTTAGATTAATTAATGTAATTTCAATGCTTGGATTAAGTATTATTTTTACAACATTAAGTTC ATGTAAAAATCTTCAACAACAAAAACCGTATGATACTAATTGATTATTCAAAAATAAAAATTGGAGATTGAATAATTTTT TTCGTGATCCTTATAAAATTCATTTAGAATTTGCTCGCCAATTAGATAATGTTTTAAATTTTAATGAATTAAAAAAACGT CTACCAAAACCAATGCAAAATGTACATTCATTTACTGAATGAAGTCTAAAGATCGCACGTTTATTAAAAAATGATATTAA TAATGTAGCAATGCTCGATAGCATCCAAAAAATGCGCAATCATAAAGCAACTGTTTTAGTTATAGAAAATCGTAATGAAT TAGTTAATAATAAAGAAAATTATAATAAATTTTCTATTCTAACACCTTCAGATTTTCCACTAATCTATTCTAATCCTTAT ACAGAAGTTCCAGGATTGGGATTGAATTTTCCAAAACCAATTAATAATGATATTAGTGATATTATTGATCGTTATCAATC AATTGGTTATAATGCATTAAGAACAAACCCGCTCGAATCAGTCTTAAAACAAACATCTTCATTTTATAAAACAGCTGATT ATGTTTTTTATATGTATGATTCTAATTTATTTACTAATAATAAATACAAAACAGATGGTCAAAAACGTGAAGATTTATTT AAAGAAATTTTATCAAACAAAAATTTTTATGCTCATAAATTCTTACGCAATTCTCGTTCAAAAATTATTTTTATTGATCG TTCATTGTTTTGATGAGGTTCTTTTACAATGGTTGGGCAATCACTAATTATTAAAGAATTATTAAAAATTTTCACAAATA AAAAAACAATAAAAAAACAATGAAGTTATCTCCCATTTAATAAAGAAGAATTAATAAATTTATTTGATCACAAACCAACT ATTAAAGAGCGTAATTTAATAATTAAACCTCATTATATAAATAAAAATTTTAAGCTAACTTATGGTTATAAAATTGTTGG GACATGAGCAGATAGTATTGATCATTTAATTTCATTCGGTTTAAAACCTGATGCAATAGTTGATTATGAAAGTTTTAATA ATATTAATTTAAAAACCCAAGGTGTTGGTAATTATTTAAAAGAGTTGATTAATTATGATAAATTAGAAAAAATTAATAAG GCTCCTAATGATAGTGAAAAAGCGGAATTTGTTGATAAAAATTTTGCAATTTATATGGGCCCATCCCATTTATTAAACTC AATGAATAAATTAATTATGATTAAAAATACAGGATCTTGAATAATTAGTAGTACACAAGGAATTAATGATCCCAAAACCC AATTTAAAACAAGAATCAACACGGCTAAATCAGATTTTTAA
Upstream 100 bases:
>100_bases GAATGAGTTTTATAGGAGCACCTGTTTTAGCTTATTTGGGTTGAAAACATTGAAATAGAGCTTAATTTTTATTAAAATAA ATAATAAAATGGTTTTAATA
Downstream 100 bases:
>100_bases TTTATAATAATATATTATGAAAATAAAATTGAAATTTGAAAATAAACTTAATTTTAAAAAATATTTAATATATAAATGAA GTGTTTTTGTTGTTTTGGTT
Product: putative ABC substrate-binding protein - iron
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTNWLFKNKNWRLNNFFRDPYKIHLEFARQLDNVLNFNELKKR LPKPMQNVHSFTEWSLKIARLLKNDINNVAMLDSIQKMRNHKATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPY TEVPGLGLNFPKPINNDISDIIDRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLF KEILSNKNFYAHKFLRNSRSKIIFIDRSLFWWGSFTMVGQSLIIKELLKIFTNKKTIKKQWSYLPFNKEELINLFDHKPT IKERNLIIKPHYINKNFKLTYGYKIVGTWADSIDHLISFGLKPDAIVDYESFNNINLKTQGVGNYLKELINYDKLEKINK APNDSEKAEFVDKNFAIYMGPSHLLNSMNKLIMIKNTGSWIISSTQGINDPKTQFKTRINTAKSDF
Sequences:
>Translated_466_residues MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTN*LFKNKNWRLNNFFRDPYKIHLEFARQLDNVLNFNELKKR LPKPMQNVHSFTE*SLKIARLLKNDINNVAMLDSIQKMRNHKATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPY TEVPGLGLNFPKPINNDISDIIDRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLF KEILSNKNFYAHKFLRNSRSKIIFIDRSLF**GSFTMVGQSLIIKELLKIFTNKKTIKKQ*SYLPFNKEELINLFDHKPT IKERNLIIKPHYINKNFKLTYGYKIVGT*ADSIDHLISFGLKPDAIVDYESFNNINLKTQGVGNYLKELINYDKLEKINK APNDSEKAEFVDKNFAIYMGPSHLLNSMNKLIMIKNTGS*IISSTQGINDPKTQFKTRINTAKSDF >Mature_466_residues MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTN*LFKNKNWRLNNFFRDPYKIHLEFARQLDNVLNFNELKKR LPKPMQNVHSFTE*SLKIARLLKNDINNVAMLDSIQKMRNHKATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPY TEVPGLGLNFPKPINNDISDIIDRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLF KEILSNKNFYAHKFLRNSRSKIIFIDRSLF**GSFTMVGQSLIIKELLKIFTNKKTIKKQ*SYLPFNKEELINLFDHKPT IKERNLIIKPHYINKNFKLTYGYKIVGT*ADSIDHLISFGLKPDAIVDYESFNNINLKTQGVGNYLKELINYDKLEKINK APNDSEKAEFVDKNFAIYMGPSHLLNSMNKLIMIKNTGS*IISSTQGINDPKTQFKTRINTAKSDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53386; Mature: 53386
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTNLFKNKNWRLNNFFRDPYKIH CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH LEFARQLDNVLNFNELKKRLPKPMQNVHSFTESLKIARLLKNDINNVAMLDSIQKMRNHK HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC ATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPYTEVPGLGLNFPKPINNDISDII EEEEEECCCHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH DRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLFKE HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCCCCCHHHHHHHHH ILSNKNFYAHKFLRNSRSKIIFIDRSLFGSFTMVGQSLIIKELLKIFTNKKTIKKQSYLP HHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC FNKEELINLFDHKPTIKERNLIIKPHYINKNFKLTYGYKIVGTADSIDHLISFGLKPDAI CCHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECHHHHHHHHHCCCCCCCE VDYESFNNINLKTQGVGNYLKELINYDKLEKINKAPNDSEKAEFVDKNFAIYMGPSHLLN EECCCCCCCCEEECCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHH SMNKLIMIKNTGSIISSTQGINDPKTQFKTRINTAKSDF CCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTNLFKNKNWRLNNFFRDPYKIH CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH LEFARQLDNVLNFNELKKRLPKPMQNVHSFTESLKIARLLKNDINNVAMLDSIQKMRNHK HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC ATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPYTEVPGLGLNFPKPINNDISDII EEEEEECCCHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH DRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLFKE HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCCCCCHHHHHHHHH ILSNKNFYAHKFLRNSRSKIIFIDRSLFGSFTMVGQSLIIKELLKIFTNKKTIKKQSYLP HHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC FNKEELINLFDHKPTIKERNLIIKPHYINKNFKLTYGYKIVGTADSIDHLISFGLKPDAI CCHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECHHHHHHHHHCCCCCCCE VDYESFNNINLKTQGVGNYLKELINYDKLEKINKAPNDSEKAEFVDKNFAIYMGPSHLLN EECCCCCCCCEEECCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHH SMNKLIMIKNTGSIISSTQGINDPKTQFKTRINTAKSDF CCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA