Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762442

Identifier: 170762442

GI number: 170762442

Start: 24201

End: 25601

Strand: Reverse

Name: 170762442

Synonym: UPA3_0024

Alternate gene names: NA

Gene position: 25601-24201 (Counterclockwise)

Preceding gene: 170761943

Following gene: 170762226

Centisome position: 3.41

GC content: 23.7

Gene sequence:

>1401_bases
ATGAAAATTAGTTTTAAATTTAGATTAATTAATGTAATTTCAATGCTTGGATTAAGTATTATTTTTACAACATTAAGTTC
ATGTAAAAATCTTCAACAACAAAAACCGTATGATACTAATTGATTATTCAAAAATAAAAATTGGAGATTGAATAATTTTT
TTCGTGATCCTTATAAAATTCATTTAGAATTTGCTCGCCAATTAGATAATGTTTTAAATTTTAATGAATTAAAAAAACGT
CTACCAAAACCAATGCAAAATGTACATTCATTTACTGAATGAAGTCTAAAGATCGCACGTTTATTAAAAAATGATATTAA
TAATGTAGCAATGCTCGATAGCATCCAAAAAATGCGCAATCATAAAGCAACTGTTTTAGTTATAGAAAATCGTAATGAAT
TAGTTAATAATAAAGAAAATTATAATAAATTTTCTATTCTAACACCTTCAGATTTTCCACTAATCTATTCTAATCCTTAT
ACAGAAGTTCCAGGATTGGGATTGAATTTTCCAAAACCAATTAATAATGATATTAGTGATATTATTGATCGTTATCAATC
AATTGGTTATAATGCATTAAGAACAAACCCGCTCGAATCAGTCTTAAAACAAACATCTTCATTTTATAAAACAGCTGATT
ATGTTTTTTATATGTATGATTCTAATTTATTTACTAATAATAAATACAAAACAGATGGTCAAAAACGTGAAGATTTATTT
AAAGAAATTTTATCAAACAAAAATTTTTATGCTCATAAATTCTTACGCAATTCTCGTTCAAAAATTATTTTTATTGATCG
TTCATTGTTTTGATGAGGTTCTTTTACAATGGTTGGGCAATCACTAATTATTAAAGAATTATTAAAAATTTTCACAAATA
AAAAAACAATAAAAAAACAATGAAGTTATCTCCCATTTAATAAAGAAGAATTAATAAATTTATTTGATCACAAACCAACT
ATTAAAGAGCGTAATTTAATAATTAAACCTCATTATATAAATAAAAATTTTAAGCTAACTTATGGTTATAAAATTGTTGG
GACATGAGCAGATAGTATTGATCATTTAATTTCATTCGGTTTAAAACCTGATGCAATAGTTGATTATGAAAGTTTTAATA
ATATTAATTTAAAAACCCAAGGTGTTGGTAATTATTTAAAAGAGTTGATTAATTATGATAAATTAGAAAAAATTAATAAG
GCTCCTAATGATAGTGAAAAAGCGGAATTTGTTGATAAAAATTTTGCAATTTATATGGGCCCATCCCATTTATTAAACTC
AATGAATAAATTAATTATGATTAAAAATACAGGATCTTGAATAATTAGTAGTACACAAGGAATTAATGATCCCAAAACCC
AATTTAAAACAAGAATCAACACGGCTAAATCAGATTTTTAA

Upstream 100 bases:

>100_bases
GAATGAGTTTTATAGGAGCACCTGTTTTAGCTTATTTGGGTTGAAAACATTGAAATAGAGCTTAATTTTTATTAAAATAA
ATAATAAAATGGTTTTAATA

Downstream 100 bases:

>100_bases
TTTATAATAATATATTATGAAAATAAAATTGAAATTTGAAAATAAACTTAATTTTAAAAAATATTTAATATATAAATGAA
GTGTTTTTGTTGTTTTGGTT

Product: putative ABC substrate-binding protein - iron

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTNWLFKNKNWRLNNFFRDPYKIHLEFARQLDNVLNFNELKKR
LPKPMQNVHSFTEWSLKIARLLKNDINNVAMLDSIQKMRNHKATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPY
TEVPGLGLNFPKPINNDISDIIDRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLF
KEILSNKNFYAHKFLRNSRSKIIFIDRSLFWWGSFTMVGQSLIIKELLKIFTNKKTIKKQWSYLPFNKEELINLFDHKPT
IKERNLIIKPHYINKNFKLTYGYKIVGTWADSIDHLISFGLKPDAIVDYESFNNINLKTQGVGNYLKELINYDKLEKINK
APNDSEKAEFVDKNFAIYMGPSHLLNSMNKLIMIKNTGSWIISSTQGINDPKTQFKTRINTAKSDF

Sequences:

>Translated_466_residues
MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTN*LFKNKNWRLNNFFRDPYKIHLEFARQLDNVLNFNELKKR
LPKPMQNVHSFTE*SLKIARLLKNDINNVAMLDSIQKMRNHKATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPY
TEVPGLGLNFPKPINNDISDIIDRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLF
KEILSNKNFYAHKFLRNSRSKIIFIDRSLF**GSFTMVGQSLIIKELLKIFTNKKTIKKQ*SYLPFNKEELINLFDHKPT
IKERNLIIKPHYINKNFKLTYGYKIVGT*ADSIDHLISFGLKPDAIVDYESFNNINLKTQGVGNYLKELINYDKLEKINK
APNDSEKAEFVDKNFAIYMGPSHLLNSMNKLIMIKNTGS*IISSTQGINDPKTQFKTRINTAKSDF
>Mature_466_residues
MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTN*LFKNKNWRLNNFFRDPYKIHLEFARQLDNVLNFNELKKR
LPKPMQNVHSFTE*SLKIARLLKNDINNVAMLDSIQKMRNHKATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPY
TEVPGLGLNFPKPINNDISDIIDRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLF
KEILSNKNFYAHKFLRNSRSKIIFIDRSLF**GSFTMVGQSLIIKELLKIFTNKKTIKKQ*SYLPFNKEELINLFDHKPT
IKERNLIIKPHYINKNFKLTYGYKIVGT*ADSIDHLISFGLKPDAIVDYESFNNINLKTQGVGNYLKELINYDKLEKINK
APNDSEKAEFVDKNFAIYMGPSHLLNSMNKLIMIKNTGS*IISSTQGINDPKTQFKTRINTAKSDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53386; Mature: 53386

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTNLFKNKNWRLNNFFRDPYKIH
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
LEFARQLDNVLNFNELKKRLPKPMQNVHSFTESLKIARLLKNDINNVAMLDSIQKMRNHK
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
ATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPYTEVPGLGLNFPKPINNDISDII
EEEEEECCCHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH
DRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLFKE
HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCCCCCHHHHHHHHH
ILSNKNFYAHKFLRNSRSKIIFIDRSLFGSFTMVGQSLIIKELLKIFTNKKTIKKQSYLP
HHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
FNKEELINLFDHKPTIKERNLIIKPHYINKNFKLTYGYKIVGTADSIDHLISFGLKPDAI
CCHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECHHHHHHHHHCCCCCCCE
VDYESFNNINLKTQGVGNYLKELINYDKLEKINKAPNDSEKAEFVDKNFAIYMGPSHLLN
EECCCCCCCCEEECCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHH
SMNKLIMIKNTGSIISSTQGINDPKTQFKTRINTAKSDF
CCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKISFKFRLINVISMLGLSIIFTTLSSCKNLQQQKPYDTNLFKNKNWRLNNFFRDPYKIH
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
LEFARQLDNVLNFNELKKRLPKPMQNVHSFTESLKIARLLKNDINNVAMLDSIQKMRNHK
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
ATVLVIENRNELVNNKENYNKFSILTPSDFPLIYSNPYTEVPGLGLNFPKPINNDISDII
EEEEEECCCHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHH
DRYQSIGYNALRTNPLESVLKQTSSFYKTADYVFYMYDSNLFTNNKYKTDGQKREDLFKE
HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCEEEEEECCCEEECCCCCCCCHHHHHHHHH
ILSNKNFYAHKFLRNSRSKIIFIDRSLFGSFTMVGQSLIIKELLKIFTNKKTIKKQSYLP
HHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
FNKEELINLFDHKPTIKERNLIIKPHYINKNFKLTYGYKIVGTADSIDHLISFGLKPDAI
CCHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECHHHHHHHHHCCCCCCCE
VDYESFNNINLKTQGVGNYLKELINYDKLEKINKAPNDSEKAEFVDKNFAIYMGPSHLLN
EECCCCCCCCEEECCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHCCCCEEEECHHHHHH
SMNKLIMIKNTGSIISSTQGINDPKTQFKTRINTAKSDF
CCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA