Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

Click here to switch to the map view.

The map label for this gene is 170762383

Identifier: 170762383

GI number: 170762383

Start: 83753

End: 84409

Strand: Reverse

Name: 170762383

Synonym: UPA3_0067

Alternate gene names: NA

Gene position: 84409-83753 (Counterclockwise)

Preceding gene: 170762176

Following gene: 170762420

Centisome position: 11.23

GC content: 26.64

Gene sequence:

>657_bases
ATGAATTTTAAAAGTACCATCGTTAATAAAAAACCGATTGATTGGAAACACACAATTGTTTTAGAAGAATTAAATGTTGA
TCCTAAAGCATTAGAAATGCATAAAGAAAGAATTAACACAGTTTTTGCAAAACAAACTGAAGAACAACGTTCTCAACAAT
TACATAACATTATTGTTCGTGAAAATTTGTTTAATAAAGCAATGACATATCTTGCTGATTTTTATGAAATTGATGTTAAT
GAAGAAGATATTAAAGATTTAGCACCACGTATTAAACAAGCATTTGGTGTTGAAGATGAAAAGTTAGCTTATGAAATTGC
ACAAAAAATCATCGCTAAAGCACTAATTTTTCAAGATTTACAAAAAGAATTTACAATTGAAATTAAAGATGAAGAATTAA
CAAAAATACTTGAATCATACTATGAAGAGACAAACTTATCAATTCGTGACTTTAAAGAAAACAAAGCACAATGAGAAGCT
GCAAAATCAACATTATTAGAAGAAAAAACAACAGCGTTTATTGTTGATAAATTTGATCGTGATTTATCAATTCTTGAAGC
TAATATTCGTAAGAAAATAGCTGAACAAATGGAACTTGATAAAAAGATAAAGGAAATACAAGACAATAACAAATCAAAAC
AAAACGCTGACAAATAA

Upstream 100 bases:

>100_bases
TAGTGAATAATATTTTAGTAATTAAAGTAAATAAATTAAAATATTATAATATACGTGTATTAAACTCATGATTTATTTGA
TAACTAAAAGGAAATAATAT

Downstream 100 bases:

>100_bases
AACTTACATTGTTCGCTATATTATCTTAAAAATAGCTATGGATCAATATAAAATAAATGAATTGATTCCTAGTGAGTATA
AACTAGCAAGTTATTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNFKSTIVNKKPIDWKHTIVLEELNVDPKALEMHKERINTVFAKQTEEQRSQQLHNIIVRENLFNKAMTYLADFYEIDVN
EEDIKDLAPRIKQAFGVEDEKLAYEIAQKIIAKALIFQDLQKEFTIEIKDEELTKILESYYEETNLSIRDFKENKAQWEA
AKSTLLEEKTTAFIVDKFDRDLSILEANIRKKIAEQMELDKKIKEIQDNNKSKQNADK

Sequences:

>Translated_218_residues
MNFKSTIVNKKPIDWKHTIVLEELNVDPKALEMHKERINTVFAKQTEEQRSQQLHNIIVRENLFNKAMTYLADFYEIDVN
EEDIKDLAPRIKQAFGVEDEKLAYEIAQKIIAKALIFQDLQKEFTIEIKDEELTKILESYYEETNLSIRDFKENKAQ*EA
AKSTLLEEKTTAFIVDKFDRDLSILEANIRKKIAEQMELDKKIKEIQDNNKSKQNADK
>Mature_218_residues
MNFKSTIVNKKPIDWKHTIVLEELNVDPKALEMHKERINTVFAKQTEEQRSQQLHNIIVRENLFNKAMTYLADFYEIDVN
EEDIKDLAPRIKQAFGVEDEKLAYEIAQKIIAKALIFQDLQKEFTIEIKDEELTKILESYYEETNLSIRDFKENKAQ*EA
AKSTLLEEKTTAFIVDKFDRDLSILEANIRKKIAEQMELDKKIKEIQDNNKSKQNADK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008880 [H]

Pfam domain/function: PF05698 Trigger_C [H]

EC number: NA

Molecular weight: Translated: 25523; Mature: 25523

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKSTIVNKKPIDWKHTIVLEELNVDPKALEMHKERINTVFAKQTEEQRSQQLHNIIVR
CCCHHHCCCCCCCCCHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLFNKAMTYLADFYEIDVNEEDIKDLAPRIKQAFGVEDEKLAYEIAQKIIAKALIFQDL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QKEFTIEIKDEELTKILESYYEETNLSIRDFKENKAQEAAKSTLLEEKTTAFIVDKFDRD
HHHHEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LSILEANIRKKIAEQMELDKKIKEIQDNNKSKQNADK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNFKSTIVNKKPIDWKHTIVLEELNVDPKALEMHKERINTVFAKQTEEQRSQQLHNIIVR
CCCHHHCCCCCCCCCHHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENLFNKAMTYLADFYEIDVNEEDIKDLAPRIKQAFGVEDEKLAYEIAQKIIAKALIFQDL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QKEFTIEIKDEELTKILESYYEETNLSIRDFKENKAQEAAKSTLLEEKTTAFIVDKFDRD
HHHHEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LSILEANIRKKIAEQMELDKKIKEIQDNNKSKQNADK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]