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The map label for this gene is infA

Identifier: 170762355

GI number: 170762355

Start: 288547

End: 288771

Strand: Direct

Name: infA

Synonym: UPA3_0261

Alternate gene names: 170762355

Gene position: 288547-288771 (Clockwise)

Preceding gene: 170762236

Following gene: 170761952

Centisome position: 38.39

GC content: 33.33

Gene sequence:

>225_bases
ATGGCAGATACAGAAAAATTAAAAATGCTTGGTAAAATTGTTGAAGTTTTACAAGGCGGAAATTTTAGAGTTCAATTAGA
AAATGGCATCACGATTATGAGCCACGTATCAGGTAAAATGCGTGTTAATAAAATTAACATTTTACCAGGTGATACTGTTG
ATGTTGAGTTAAGTCCATACGACCTAACACGTGGAAGAATTACATATCGTCATCGTGATAACTAA

Upstream 100 bases:

>100_bases
TCATCAAATGACTTGTCATTGAGAACATATGATTCTAATTACAAAAGATGGTTGTGAAGTTTTAACAGATTAAGGGATAT
ATTTTAAACAAGGAATAAAA

Downstream 100 bases:

>100_bases
AATTAAACGAAAGGAAAACTATAATGAAAGTTAGAGCTTCAGTTAAAGCAATTTGTAAAGATTGCAAAATCGTAAAGCGA
TCAGGTGTTGTGCGTGTTAT

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MADTEKLKMLGKIVEVLQGGNFRVQLENGITIMSHVSGKMRVNKINILPGDTVDVELSPYDLTRGRITYRHRDN

Sequences:

>Translated_74_residues
MADTEKLKMLGKIVEVLQGGNFRVQLENGITIMSHVSGKMRVNKINILPGDTVDVELSPYDLTRGRITYRHRDN
>Mature_73_residues
ADTEKLKMLGKIVEVLQGGNFRVQLENGITIMSHVSGKMRVNKINILPGDTVDVELSPYDLTRGRITYRHRDN

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=52.7777777777778, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_UREPA (Q9PQN8)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_078087.1
- ProteinModelPortal:   Q9PQN8
- SMR:   Q9PQN8
- GeneID:   875773
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU253
- HOGENOM:   HBG286099
- OMA:   KMRMHFI
- ProtClustDB:   PRK00276
- BioCyc:   UURE95667:UU253-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8384; Mature: 8253

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTEKLKMLGKIVEVLQGGNFRVQLENGITIMSHVSGKMRVNKINILPGDTVDVELSPY
CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCEEEEEEEEECCCCEEEEEECCC
DLTRGRITYRHRDN
CCCCCEEEEEECCC
>Mature Secondary Structure 
ADTEKLKMLGKIVEVLQGGNFRVQLENGITIMSHVSGKMRVNKINILPGDTVDVELSPY
CCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCEEEEEEEEECCCCEEEEEECCC
DLTRGRITYRHRDN
CCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724