Click here to switch to the map view.

The map label for this gene is ftsY

Identifier: 170762333

GI number: 170762333

Start: 182619

End: 183674

Strand: Direct

Name: ftsY

Synonym: UPA3_0147

Alternate gene names: 170762333

Gene position: 182619-183674 (Clockwise)

Preceding gene: 170762065

Following gene: 170761887

Centisome position: 24.29

GC content: 26.8

Gene sequence:

>1056_bases
ATGGGTTTTTTTAAAAAAATATTCAATAAAATTCTAGGAAAAAAAGACACAGAACAAATATCACAAGAGATTTCACAAAA
AAATGAAGAAAATCGTATTTTAAAATTAGAGGATAATTCGATTAATAAATTTAATGAAGGATTAAGAAAATCATCTTCTG
CTTTAACTGATGCTATTAACGAATTAGCAGTTAAATATATAGATATTGATGAACGATGATATGAACATTTAGAAGAAGTT
TTAATTAGTTATGATGTAGGCTATGTTGCAACTAATAAAATTATTGAATCAATTAGAAATGAAATGATTTACCAAAAAGT
TAATGATCCTGATTTAATAAAGTCTATTATTATTGATAAAATTTTTATTTATTATATTCAAGATACAGAAATTAATACAG
CAATTAATTTAAAAGAAAATCAAACTAATGTAGTTTTGGTGGTTGGGGTTAATGGCGTTGGTAAAACAACATCAATCGCA
AAAATCACTAAAAAATTCATTGATGAAAATAAAAAAGTTCTCTTAGTAGCTGGAGATACATTTAGAGCAGGTGCTGTTGA
ACAATTAAAAGTTTGAGCACAACGCTTAGGTGTTGACATTGAATTACCTAATAAAGAGGGTCAAGATCCTGCTTCTGTCA
TATACGCTGGAGTTAAAAAAGGTTATGAACAAAAATATGATTTAGTAATTTGTGATACATCAGGTAGATTACAAAATAAA
ATTAATTTGATGAATGAATTAAAAAAAATTCATGATGTAATTCATAAATTTGATGAATACGCTCCGCACGAAACTTTATT
AGTTTTAGATGCCACTCAAGGCCAATCAGGAATTAATCAAGCAAAAGCATTTAACGAAGTAACGAAAATTTCAGGGATTA
TTTTAACTAAAATGGATTCTACAAGTCGTGGGGGAATTGTATTAGCAATCAAAGATGCTTTTAATATACCTGTGAAATTG
ATTGGTTTAGGCGAAAAATTAGAGGATTTAAGTGTATTTGATTTAGAAATGTATGTTGATAGCATAGTTTTAGGAATGAA
ATTAGATGTTAAATAA

Upstream 100 bases:

>100_bases
GTTATCTTTTAGGTACAACAATGATGAATAACGGAGTAACAACATTACTAGAAGTTGATTTAAATGATACAAAAATAAAA
TATGAAAGTGAATTATAAAA

Downstream 100 bases:

>100_bases
GAATAAACGTTGATATTTGATTGCTTTATATGATATTTATCAAGGATTATTAACAACAAAACAATGTGAATATTTTAATT
TACATTATTTTAAAGATTTG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MGFFKKIFNKILGKKDTEQISQEISQKNEENRILKLEDNSINKFNEGLRKSSSALTDAINELAVKYIDIDERWYEHLEEV
LISYDVGYVATNKIIESIRNEMIYQKVNDPDLIKSIIIDKIFIYYIQDTEINTAINLKENQTNVVLVVGVNGVGKTTSIA
KITKKFIDENKKVLLVAGDTFRAGAVEQLKVWAQRLGVDIELPNKEGQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNK
INLMNELKKIHDVIHKFDEYAPHETLLVLDATQGQSGINQAKAFNEVTKISGIILTKMDSTSRGGIVLAIKDAFNIPVKL
IGLGEKLEDLSVFDLEMYVDSIVLGMKLDVK

Sequences:

>Translated_351_residues
MGFFKKIFNKILGKKDTEQISQEISQKNEENRILKLEDNSINKFNEGLRKSSSALTDAINELAVKYIDIDER*YEHLEEV
LISYDVGYVATNKIIESIRNEMIYQKVNDPDLIKSIIIDKIFIYYIQDTEINTAINLKENQTNVVLVVGVNGVGKTTSIA
KITKKFIDENKKVLLVAGDTFRAGAVEQLKV*AQRLGVDIELPNKEGQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNK
INLMNELKKIHDVIHKFDEYAPHETLLVLDATQGQSGINQAKAFNEVTKISGIILTKMDSTSRGGIVLAIKDAFNIPVKL
IGLGEKLEDLSVFDLEMYVDSIVLGMKLDVK
>Mature_350_residues
GFFKKIFNKILGKKDTEQISQEISQKNEENRILKLEDNSINKFNEGLRKSSSALTDAINELAVKYIDIDER*YEHLEEVL
ISYDVGYVATNKIIESIRNEMIYQKVNDPDLIKSIIIDKIFIYYIQDTEINTAINLKENQTNVVLVVGVNGVGKTTSIAK
ITKKFIDENKKVLLVAGDTFRAGAVEQLKV*AQRLGVDIELPNKEGQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNKI
NLMNELKKIHDVIHKFDEYAPHETLLVLDATQGQSGINQAKAFNEVTKISGIILTKMDSTSRGGIVLAIKDAFNIPVKLI
GLGEKLEDLSVFDLEMYVDSIVLGMKLDVK

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=213, Percent_Identity=32.3943661971831, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI4507215, Length=213, Percent_Identity=32.3943661971831, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI23308697, Length=229, Percent_Identity=29.6943231441048, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI295424842, Length=229, Percent_Identity=29.6943231441048, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI89061728, Length=138, Percent_Identity=31.8840579710145, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI1789874, Length=258, Percent_Identity=39.922480620155, Blast_Score=204, Evalue=6e-54,
Organism=Escherichia coli, GI1788963, Length=275, Percent_Identity=35.6363636363636, Blast_Score=161, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17539958, Length=232, Percent_Identity=31.4655172413793, Blast_Score=117, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=29.6666666666667, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=305, Percent_Identity=30.8196721311475, Blast_Score=142, Evalue=6e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=228, Percent_Identity=30.7017543859649, Blast_Score=96, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17647949, Length=208, Percent_Identity=34.6153846153846, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24641198, Length=311, Percent_Identity=27.6527331189711, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 39142; Mature: 39010

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFKKIFNKILGKKDTEQISQEISQKNEENRILKLEDNSINKFNEGLRKSSSALTDAIN
CCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
ELAVKYIDIDERYEHLEEVLISYDVGYVATNKIIESIRNEMIYQKVNDPDLIKSIIIDKI
HHHHHEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE
FIYYIQDTEINTAINLKENQTNVVLVVGVNGVGKTTSIAKITKKFIDENKKVLLVAGDTF
EEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
RAGAVEQLKVAQRLGVDIELPNKEGQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNKIN
CCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
LMNELKKIHDVIHKFDEYAPHETLLVLDATQGQSGINQAKAFNEVTKISGIILTKMDSTS
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC
RGGIVLAIKDAFNIPVKLIGLGEKLEDLSVFDLEMYVDSIVLGMKLDVK
CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCC
>Mature Secondary Structure 
GFFKKIFNKILGKKDTEQISQEISQKNEENRILKLEDNSINKFNEGLRKSSSALTDAIN
CHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
ELAVKYIDIDERYEHLEEVLISYDVGYVATNKIIESIRNEMIYQKVNDPDLIKSIIIDKI
HHHHHEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHE
FIYYIQDTEINTAINLKENQTNVVLVVGVNGVGKTTSIAKITKKFIDENKKVLLVAGDTF
EEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
RAGAVEQLKVAQRLGVDIELPNKEGQDPASVIYAGVKKGYEQKYDLVICDTSGRLQNKIN
CCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH
LMNELKKIHDVIHKFDEYAPHETLLVLDATQGQSGINQAKAFNEVTKISGIILTKMDSTS
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC
RGGIVLAIKDAFNIPVKLIGLGEKLEDLSVFDLEMYVDSIVLGMKLDVK
CCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]