Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762251
Identifier: 170762251
GI number: 170762251
Start: 22136
End: 23158
Strand: Reverse
Name: 170762251
Synonym: UPA3_0022
Alternate gene names: NA
Gene position: 23158-22136 (Counterclockwise)
Preceding gene: 170762226
Following gene: 170762067
Centisome position: 3.08
GC content: 23.95
Gene sequence:
>1023_bases ATGAGTATAAAAATTAAGCATGATCAAAATTTAAAACACCAATTTGAACAAAAATTATTTTTTCGTTTTAAAAAGAACAA ATTTTTTCTTTCATTAAGTTTATTAATAATAACAATTATTTTAACGCTGATTGCTGTAGCTGGAGCCTCGCGTTTTATAA ATGTTTTTAGTTATTTGAGCGATTGAAAAATTATCACACAATTATTGTTTTCTGGAATTGCATTAGGAATTAGTGGTTAT ATTCTTCAAAGATTAACAAAAAATCGTTTAGCAGATAGTTCTTTATTAGGAATGGGCAATATTAACTTAGTGATTTTAAC AATACTTTTTTTAATATTTGATTTTGGGCAATTGCAAATCCAAAAACGAATGGAATATGTTCTACCATTTATTTATTTAA TTGGGTCAACAATGATTTGTTTTTTTATTCATTTTTTATGCAATTCTTCTACTGGATACATTTTTAAAAGAATTATTGTT TCAGGTATTATTATTAATTTGATTACAATTGTTATTGCTCAGTCATTAAGAATTTTAATGAGTAAAGAATCAAGTATGTA TTTAAAAACAATTTTATTAGGTAATATTGAATCACGCAGCGATTTTTGTTTTTATTTTTGTTTTGGAATGCTTACTATTA GTGTTATTTGGTTAATGTTAAATGCAACTAAATTTAAGATTATGGTAACAAATCAACAAATATCTGGACAGTTAGGCATT AATAATAAGTCCTTGACAATTCAAACTTTTATTTGCATTAGCTTATTAGTATCGGTAAGTTATAGTTTAAGTGGTAATGT TATTTTTGTTGGGATTGTTGCAGCTAATTTTTCTTTCAATTATGTAAAAAACAATATTTCTAATGGCATTATTAATGCTG GATTAATAGGCGGCATTGTATTATTGATTAGTTATATTTTTGTTGTTTTAATTTTAAATTTATCAACTGACCAGACTATT TTATTAGTGCCAATTATTTCAGGACCATATTTTTTATATCAAGTTATTTTATTGAAAAATTAA
Upstream 100 bases:
>100_bases TTCAAAATTTAATATTGTTTTTTTAGTAGCAACAGTTTTTGCGATTCCAATGATTGTTTTGCTAAAATGAGAATTAGGAT GGAAAGTGAATAAAAATTAA
Downstream 100 bases:
>100_bases ATTTATACTTTATCTCATTAAAGATTGGTTTTTTATAATAAAATATTAACTATTAAATAAGTTGATTATTTTTTTATTTA AAATTAAAAAAAGAAAGTAA
Product: ferrichrome ABC transporter
Products: NA
Alternate protein names: Hemin Permease; Ferric Anguibactin Transport System Permerase Protein
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSIKIKHDQNLKHQFEQKLFFRFKKNKFFLSLSLLIITIILTLIAVAGASRFINVFSYLSDWKIITQLLFSGIALGISGY ILQRLTKNRLADSSLLGMGNINLVILTILFLIFDFGQLQIQKRMEYVLPFIYLIGSTMICFFIHFLCNSSTGYIFKRIIV SGIIINLITIVIAQSLRILMSKESSMYLKTILLGNIESRSDFCFYFCFGMLTISVIWLMLNATKFKIMVTNQQISGQLGI NNKSLTIQTFICISLLVSVSYSLSGNVIFVGIVAANFSFNYVKNNISNGIINAGLIGGIVLLISYIFVVLILNLSTDQTI LLVPIISGPYFLYQVILLKN
Sequences:
>Translated_340_residues MSIKIKHDQNLKHQFEQKLFFRFKKNKFFLSLSLLIITIILTLIAVAGASRFINVFSYLSD*KIITQLLFSGIALGISGY ILQRLTKNRLADSSLLGMGNINLVILTILFLIFDFGQLQIQKRMEYVLPFIYLIGSTMICFFIHFLCNSSTGYIFKRIIV SGIIINLITIVIAQSLRILMSKESSMYLKTILLGNIESRSDFCFYFCFGMLTISVIWLMLNATKFKIMVTNQQISGQLGI NNKSLTIQTFICISLLVSVSYSLSGNVIFVGIVAANFSFNYVKNNISNGIINAGLIGGIVLLISYIFVVLILNLSTDQTI LLVPIISGPYFLYQVILLKN >Mature_339_residues SIKIKHDQNLKHQFEQKLFFRFKKNKFFLSLSLLIITIILTLIAVAGASRFINVFSYLSD*KIITQLLFSGIALGISGYI LQRLTKNRLADSSLLGMGNINLVILTILFLIFDFGQLQIQKRMEYVLPFIYLIGSTMICFFIHFLCNSSTGYIFKRIIVS GIIINLITIVIAQSLRILMSKESSMYLKTILLGNIESRSDFCFYFCFGMLTISVIWLMLNATKFKIMVTNQQISGQLGIN NKSLTIQTFICISLLVSVSYSLSGNVIFVGIVAANFSFNYVKNNISNGIINAGLIGGIVLLISYIFVVLILNLSTDQTIL LVPIISGPYFLYQVILLKN
Specific function: Unknown
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38140; Mature: 38008
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKIKHDQNLKHQFEQKLFFRFKKNKFFLSLSLLIITIILTLIAVAGASRFINVFSYLS CEEEECCCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIITQLLFSGIALGISGYILQRLTKNRLADSSLLGMGNINLVILTILFLIFDFGQLQIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCHHHHHH KRMEYVLPFIYLIGSTMICFFIHFLCNSSTGYIFKRIIVSGIIINLITIVIAQSLRILMS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KESSMYLKTILLGNIESRSDFCFYFCFGMLTISVIWLMLNATKFKIMVTNQQISGQLGIN CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCC NKSLTIQTFICISLLVSVSYSLSGNVIFVGIVAANFSFNYVKNNISNGIINAGLIGGIVL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHH LISYIFVVLILNLSTDQTILLVPIISGPYFLYQVILLKN HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCC >Mature Secondary Structure SIKIKHDQNLKHQFEQKLFFRFKKNKFFLSLSLLIITIILTLIAVAGASRFINVFSYLS EEEECCCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIITQLLFSGIALGISGYILQRLTKNRLADSSLLGMGNINLVILTILFLIFDFGQLQIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHCHHHHHH KRMEYVLPFIYLIGSTMICFFIHFLCNSSTGYIFKRIIVSGIIINLITIVIAQSLRILMS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KESSMYLKTILLGNIESRSDFCFYFCFGMLTISVIWLMLNATKFKIMVTNQQISGQLGIN CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCC NKSLTIQTFICISLLVSVSYSLSGNVIFVGIVAANFSFNYVKNNISNGIINAGLIGGIVL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHH LISYIFVVLILNLSTDQTILLVPIISGPYFLYQVILLKN HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA