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The map label for this gene is recR

Identifier: 170762232

GI number: 170762232

Start: 107897

End: 108502

Strand: Direct

Name: recR

Synonym: UPA3_0089

Alternate gene names: 170762232

Gene position: 107897-108502 (Clockwise)

Preceding gene: 170762369

Following gene: 170762009

Centisome position: 14.35

GC content: 26.73

Gene sequence:

>606_bases
ATGAGTAAACCAGTAGAATTTGAAATGCTTGTTGATGCACTTAAATCATTACCTGGTGTAGGAACAAAAAATGCTAATAA
ATGAGCATTTTTTTTGTTACAACAAGATCAAAAATACATTGATGATCTTATTAAAAGAATTAAAGAAGCAAAAACAAATA
TTTTAAAATGTAAGTATTGTGCTAATTTTACAAATAAAGACGAATGCGATATTTGTTTAAATGAATATCGTGATTTTACT
AAATTAATGATTGTTACCACAAACGAGGATTTAGAAAGAATCGAATCAGCTAACATTTATAATGGCCTATATCATATTAC
AAATGGTGAAATCTCTTTAAGGAAAAACGTTGTTATTGAACATACAAACATTAAGACTATTAAAGAGCGTGTTTTAAATG
GTAGTTTTAAAGAAATAATTATTGCTACAAGTTATACCCATGATGGGGAAGTTACGGCTGATTATATTATAAGAATGCTT
GAAGACATTAAAGATTTACAAATTTATCGTATTGGCTTTGGTATTCCTTTAAATTCAAGCATTGATTATGCAGATGATGA
AACTTTAAAGCAGTCTCTTATTAATAAACGGAAAATAAGAAATTAA

Upstream 100 bases:

>100_bases
GTGCAGCGATCAATGAAGCAATCTCTATAACATGTAAAGAACGAGATGCGATTATGAATGCTACAATCCCTAAAGGAACA
GGTCTTTTTTAGAATTAATT

Downstream 100 bases:

>100_bases
TTTTTTATTTTAAAACAATCTTTAATTATTCATTTTAAATGGGGGTTATAATAATTGTATAATTATAAGGAGGTTAAACA
TATGGGTTACGGTAAAGGAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSKPVEFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCANFTNKDECDICLNEYRDFT
KLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRML
EDIKDLQIYRIGFGIPLNSSIDYADDETLKQSLINKRKIRN

Sequences:

>Translated_201_residues
MSKPVEFEMLVDALKSLPGVGTKNANK*AFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCANFTNKDECDICLNEYRDFT
KLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRML
EDIKDLQIYRIGFGIPLNSSIDYADDETLKQSLINKRKIRN
>Mature_200_residues
SKPVEFEMLVDALKSLPGVGTKNANK*AFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCANFTNKDECDICLNEYRDFTK
LMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLE
DIKDLQIYRIGFGIPLNSSIDYADDETLKQSLINKRKIRN

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=192, Percent_Identity=31.7708333333333, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 23091; Mature: 22960

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPVEFEMLVDALKSLPGVGTKNANKAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCA
CCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHC
NFTNKDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEH
CCCCCCHHHHHHHHHHCCEEEEEEECCHHHHHHHHCCHHCCEEEEECCEEEEECCEEEEE
TNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPLNSSI
CCHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCC
DYADDETLKQSLINKRKIRN
CCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKPVEFEMLVDALKSLPGVGTKNANKAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCA
CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEHHHC
NFTNKDECDICLNEYRDFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEH
CCCCCCHHHHHHHHHHCCEEEEEEECCHHHHHHHHCCHHCCEEEEECCEEEEECCEEEEE
TNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPLNSSI
CCHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCC
DYADDETLKQSLINKRKIRN
CCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA