Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
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Accession | NC_010498 |
Length | 5,068,389 |
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The map label for this gene is thiK [H]
Identifier: 170684187
GI number: 170684187
Start: 2042443
End: 2043267
Strand: Reverse
Name: thiK [H]
Synonym: EcSMS35_2020
Alternate gene names: 170684187
Gene position: 2043267-2042443 (Counterclockwise)
Preceding gene: 170682321
Following gene: 170683662
Centisome position: 40.31
GC content: 53.45
Gene sequence:
>825_bases GTGCCGTTTCGCAGCAATAATCCCCTCACGCGCGACGAATTGCTGTCGCGCTTTTTCCCGCAGTTTCATCCCGTCACGAC GTTTAATAGTGGGCTTAGTGGCGGGAGTTTTCTCATTGAACATCAGGGCCAGCGTTTTGTTGTGCGTCAGCCGCACGATC CTGATGCGCCGCAGTCCGCGTTCTTGCGCCAGTATCGGGCTTTATCACAACTACCCGCATGCATTGCACCGAAGCCGCAT TTATATCTCCGTGACTGGATGGTAGTCGACTATCTGCCCGGCGAGGTAAAAACGTATTTGCCGGATACTAACGAACTGGC AGGCTTGCTGTATTATCTACATCAACAACCGCGTTTTGGCTGGCGAATAACGCTGTTGCCGTTACTGGAACTGTACTGGC AGCAAAGCGATCCGGCGCGGCGGACAGTGGGTTGGCTGCGAAGGTTAAAACGTCTGCACAAAGCGCGGGAACCACGGCCT TTACGCTTAAGTCCATTGCATATGGATGTCCACGCCGGAAATTTAGTGCATAGCGCGTCAGGGTTAAAACTCATCGACTG GGAGTATGCCGGAGATGGTGATATCGCGCTGGAACTGGCGGCGGTCTGGGTGGAAAATACTGACCAGCACCGGCAATTGG TCAATGACTATGCCACTCGCGCGAAGATTTATCCGGCGCAATTATGGCGTCAGGTCAGGCGATGGTTTCCCTGGCTGCTG ATGCTCAAAGCAGGGTGGTTTGAGTACCGCTGGCGACAAACCGGCGATCAACAATTTATCAGGCTGGCCGATGACACCTG GCGGCAGCTATTAATAAAACAATAA
Upstream 100 bases:
>100_bases TACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGA AATTATCTGGTCAGGTAAAG
Downstream 100 bases:
>100_bases GGAGAGCAGTGTGGGTCCAGTAATGTTGGATGTCGAAGGTTACGAACTGGACGCGGAAGAGCGTGAAATACTGGCGCATC CGCTGGTGGGAGGGCTGATT
Product: thiamine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPH LYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRRLKRLHKAREPRP LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
Sequences:
>Translated_274_residues MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPH LYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRRLKRLHKAREPRP LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ >Mature_273_residues PFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHL YLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRRLKRLHKAREPRPL RLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLM LKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ
Specific function: Catalyzes the phosphorylation of thiamine to thiamine phosphate [H]
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine kinase family [H]
Homologues:
Organism=Escherichia coli, GI1787349, Length=274, Percent_Identity=97.8102189781022, Blast_Score=548, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014093 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.89 [H]
Molecular weight: Translated: 32432; Mature: 32300
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHH FLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG HHHHHHHHHHCCHHCCCCCCEEEECEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCC WRITLLPLLELYWQQSDPARRTVGWLRRLKRLHKAREPRPLRLSPLHMDVHAGNLVHSAS EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCCEEECCC GLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL CCEEEEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFRSNNPLTRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHH FLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGEVKTYLPDTNELAGLLYYLHQQPRFG HHHHHHHHHHCCHHCCCCCCEEEECEEEEEECCCCCEECCCCCHHHHHHHHHHHCCCCCC WRITLLPLLELYWQQSDPARRTVGWLRRLKRLHKAREPRPLRLSPLHMDVHAGNLVHSAS EEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCCEEECCC GLKLIDWEYAGDGDIALELAAVWVENTDQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL CCEEEEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ HHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA