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The map label for this gene is ydjN [H]

Identifier: 170683964

GI number: 170683964

Start: 1446562

End: 1447953

Strand: Reverse

Name: ydjN [H]

Synonym: EcSMS35_1462

Alternate gene names: 170683964

Gene position: 1447953-1446562 (Counterclockwise)

Preceding gene: 170681980

Following gene: 170680521

Centisome position: 28.57

GC content: 53.09

Gene sequence:

>1392_bases
ATGAACTTTCCATTAATTGCGAACATCGTGGTGTTCGTTGTACTGCTGTTTGCGCTGGCTCAGACCCGCCATAAACAGTG
GAGTCTGGCGAAAAAAGTGCTGGTGGGTCTGGTGATGGGTGTGGTTTTTGGCCTCGCCCTGCATACCATTTATGGTTCTG
ACAGCCAGGTACTTAAAGATTCTGTACAGTGGTTTAACATCGTTGGTAACGGCTATGTTCAACTGCTGCAAATGATCGTT
ATGCCGTTAGTCTTTGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCT
GACCATCGGAACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGG
CTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTTTGAACGCCATCGAAAGTAACTATGTTGGTAAAGTCTCTGAC
CTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATTTGACCGGAGCCAATCCGACGTCAAT
TATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCGCTCAAGCTGCTGAAGGATGATGCGCCGAAAGGTGAAC
GCGTCTTAACCGCTATCGATACCCTGCAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGCTGACCCCTTACGGC
GTTCTGGCGCTGATGACCAAAGTGGTTGCAGGTTCTAACCTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTC
CTACCTCGGTCTGCTGATTATGTTTGCAGTGCATGGCCTTCTGCTGGGCATTAATGGCGTGAGCCCGCTGAAATACTTCC
GTAAGGTATGGCCAGTTCTGACGTTTGCCTTTACCAGCCGTTCCAGTGCTGCGTCTATCCCACTGAATGTGGAAGCACAA
ACGCGTCGACTCGGTGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCATTGGTCAGAACGGCTGTGC
CGGTTTGTATCCGGCGATGCTGGCGGTGATGGTTGCGCCTACGGTTGGCATTAACCCGATGGACCCGATGTGGATTGCGA
CGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCGGTGTCGGTGGTGGTGCAACTTTCGCCGCACTGATTGTG
CTGCCTGCGATGGGCCTGCCAGTAACCCTGGTGGCGCTGTTAATCTCCGTTGAACCGCTTATCGACATGGGCCGTACGGC
GCTAAACGTTAGTGGCTCGATGACAGCTGGCACGCTGACCAGCCAGTGGCTGAAGCAAACCGATAAAGCCATTCTGGATA
GCGAAGACGACGCCGAACTGGCACACCGTTAA

Upstream 100 bases:

>100_bases
TTCCATTTGAATATAAGAGCCAGCTCACAGTTCTGTTAATCTTGCGCCAACACTATGACTGCTACGCAGTGATAGAAATA
ATAAGATCAGGAGAACGGGG

Downstream 100 bases:

>100_bases
TTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGACCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTG
ACTCATATTGAAACAGATCG

Product: sodium/dicarboxylate symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPMDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR

Sequences:

>Translated_463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPMDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR
>Mature_463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLTAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGLLLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPMDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=287, Percent_Identity=30.6620209059233, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI223468566, Length=287, Percent_Identity=30.6620209059233, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI5032093, Length=286, Percent_Identity=30.4195804195804, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI194239697, Length=468, Percent_Identity=23.5042735042735, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI21314632, Length=441, Percent_Identity=28.3446712018141, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI40254478, Length=512, Percent_Identity=26.171875, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4827012, Length=304, Percent_Identity=28.2894736842105, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI66773030, Length=374, Percent_Identity=27.0053475935829, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI169790839, Length=467, Percent_Identity=25.4817987152034, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=99.1360691144708, Blast_Score=907, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=440, Percent_Identity=26.8181818181818, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1789947, Length=436, Percent_Identity=22.9357798165138, Blast_Score=115, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI71983099, Length=442, Percent_Identity=25.7918552036199, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71983106, Length=442, Percent_Identity=25.7918552036199, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193206505, Length=481, Percent_Identity=24.3243243243243, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI193206654, Length=490, Percent_Identity=25.3061224489796, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17541374, Length=445, Percent_Identity=24.9438202247191, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71996953, Length=467, Percent_Identity=25.0535331905782, Blast_Score=95, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17537407, Length=449, Percent_Identity=24.2761692650334, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24583025, Length=462, Percent_Identity=24.8917748917749, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI17137668, Length=462, Percent_Identity=24.8917748917749, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24583023, Length=462, Percent_Identity=24.8917748917749, Blast_Score=86, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48730; Mature: 48730

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]