| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is kbaY [H]
Identifier: 170683929
GI number: 170683929
Start: 4072681
End: 4073532
Strand: Reverse
Name: kbaY [H]
Synonym: EcSMS35_3994
Alternate gene names: 170683929
Gene position: 4073532-4072681 (Counterclockwise)
Preceding gene: 170683316
Following gene: 170682060
Centisome position: 80.37
GC content: 55.75
Gene sequence:
>852_bases ATGTTTGCCGATATGAAAAGTATGGTGATGAAAGCCTGGCATGAACATTACGCCTTACTGGCGATCAACTGTATGAATCT GGAAAGTGCTCACGCAGCTATCCGCGTGGCGGAGAAGAATCGCGCTCCGATCATTCTCAATCTCTATCAGGGGCATCTGG CGCATTTTCCAGCACCCGTCGCGGCGGCAGTGGTTAAAACGCTCGCGGAATCTGCCTCAGTACCGGTCGCTCTGGCGCTT GATCATGGCAAAAATCCGGACTGTATTCGTCAGGCGTTTCGTGCTGGTTTCAGCGGATTAATGATTGATGCTTCTGCTTT TCCCCTGGAGGAAAACGTGCGCCAGACCAGGGCGGTGGTGGAACTCGCCGCCAGCGCGCAGCTCTGCGTGGAAGGCGAAC TGGGCCATCTGGCAGATGCGCCGCGTTACGACCAGGCCGCCAATGCAGACCTGATGACGCAACCCACTGATGTGGAAACG TTTATCGCGCAGACAGGCATTGATCTACTGGCCGTCTCGGTAGGCACGGCGCACGGCATGTACGCGCCTGGTGTTGTACC TGCTATTGATTTTCAGCGTCTGGCGGAGATTTTCCACTGCTCGAGCGTGCCTCTGGCATTACATGGCGGTAGCGGTACGC CGTTCGATCAGCTCCAGCTCTGTACGACGCTGGGGGTAGCAAAAATCAACGTGGGGGCGGCCATTTTTGAACGGGGGAAA TCCGCGCTCCTGCATACCCTCTGTCACGATATATCCATTGAACTGGTGGACGCGCTGAAAGCTATGGAACTGGCCTTCGA AGAAGCGATTACACCGTATTTACAGGCGAGCGGCTCTATCGGCAAAGCCTGA
Upstream 100 bases:
>100_bases AGAAACCGGTAACGGAACGCGACGAAGAGTTTGACGAACTGAGCGATCAAAAGCTGAAAGATGAAGAGATCACTTTCACC CTCGAATAACCGGAGGCCCT
Downstream 100 bases:
>100_bases TTCATTTTCTGTCATGGCCTTTATGCCAGTGCAATAACGCACCGGCAGGGCGGACTACACGCTGAAACTGGAGATTTAAC ATGTTAGTTTCGATGAAAGA
Product: fructose-bisphosphate aldolase, class II
Products: NA
Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPVAAAVVKTLAESASVPVALAL DHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVVELAASAQLCVEGELGHLADAPRYDQAANADLMTQPTDVET FIAQTGIDLLAVSVGTAHGMYAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA
Sequences:
>Translated_283_residues MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPVAAAVVKTLAESASVPVALAL DHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVVELAASAQLCVEGELGHLADAPRYDQAANADLMTQPTDVET FIAQTGIDLLAVSVGTAHGMYAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA >Mature_283_residues MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPVAAAVVKTLAESASVPVALAL DHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVVELAASAQLCVEGELGHLADAPRYDQAANADLMTQPTDVET FIAQTGIDLLAVSVGTAHGMYAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA
Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase KbaYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase KbaY subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=232, Percent_Identity=37.5, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI87082041, Length=280, Percent_Identity=34.6428571428571, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788072, Length=231, Percent_Identity=33.7662337662338, Blast_Score=144, Evalue=6e-36, Organism=Escherichia coli, GI1789293, Length=276, Percent_Identity=29.3478260869565, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000771 - InterPro: IPR011288 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.40 [H]
Molecular weight: Translated: 30050; Mature: 30050
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPV CCCCHHHHHHHHHHHCEEEEEEEECCCHHHHHHEEEECCCCCCEEEEECCCHHHHCCHHH AAAVVKTLAESASVPVALALDHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVV HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH ELAASAQLCVEGELGHLADAPRYDQAANADLMTQPTDVETFIAQTGIDLLAVSVGTAHGM HHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHEEEECCCCCCC YAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK CCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFADMKSMVMKAWHEHYALLAINCMNLESAHAAIRVAEKNRAPIILNLYQGHLAHFPAPV CCCCHHHHHHHHHHHCEEEEEEEECCCHHHHHHEEEECCCCCCEEEEECCCHHHHCCHHH AAAVVKTLAESASVPVALALDHGKNPDCIRQAFRAGFSGLMIDASAFPLEENVRQTRAVV HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH ELAASAQLCVEGELGHLADAPRYDQAANADLMTQPTDVETFIAQTGIDLLAVSVGTAHGM HHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHEEEECCCCCCC YAPGVVPAIDFQRLAEIFHCSSVPLALHGGSGTPFDQLQLCTTLGVAKINVGAAIFERGK CCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH SALLHTLCHDISIELVDALKAMELAFEEAITPYLQASGSIGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA