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The map label for this gene is arpB [H]

Identifier: 170683130

GI number: 170683130

Start: 1453897

End: 1455795

Strand: Reverse

Name: arpB [H]

Synonym: EcSMS35_1471

Alternate gene names: 170683130

Gene position: 1455795-1453897 (Counterclockwise)

Preceding gene: 170681679

Following gene: 170681839

Centisome position: 28.72

GC content: 38.81

Gene sequence:

>1899_bases
ATGAGTCAAAACGACATTATTATCAGAACTCATTATAAGTCTCCTCATAGAATGCACATCGATAGCGACATACCAACGCC
TTCATCAGAGCCTATTAATCAATTTGCGCGCCAACTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATGCTGACAT
ACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAAC
TTTGCCACTTCACCCATCCATGCAGAAAATATACTCATTACATTACACTATAAAAAAGAAATCATTTCCTTATTACTGGA
AACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGATTATATTGAACAGGAACAGTTAACTGCCGAAAATCGTA
ACCATTGTATGAAACTGTCTAAAAAAATCCATAGAGAAAAAACTATACAACCAACAGTAAATCTCAATGGTAGTGCATTT
TTTTTGCAATCTCCTTCTGACGCTATTTTTTGTCGCCATCTGTCATTGCAATACGCCCTTGATTCACTGAGAAATGGAAA
AGGCAAAGTCAATCTGATTAAACATTACTCCTCCGTTGAATCCATACAGCAGCATGTTCCCTTAGTCCGGGACGCGGAGT
TCAGATCATTACTTCGCCATCCTCCTGCAGGGAGTCGCGTTATCGCGAGTAAGGATTTTGGCTTCGCTTTAGATATTTTC
TTCTGTCGAATGATGGCAAACAATGTCAGTCATATGTCCGCGATTTTATATATAGACAATCATACTTTGTCAGTAAGGCT
ACGAATAAAGCAGTCAGCGTATGGGCAATTAAATTATGTTGTGTCCGTTTACGACCCGAACGATACCAACGTTGCCGTCA
GAGGCACCCACAGGACAGCACGGGGCTTTCTCTCGCTCGATAAATTCATCAGTTCAGGTCCCGATGCTCAGACCTGGGCT
GATATGTATGTTCGCAACTGTGCAATTGCTTTTCTGCCCCTATTACCTGAGGGAGTTCCAGGGGCTATTTTCGCGGGTAT
TGCATCACGAATGCCATTTGCCCCTATACATCCATCGGCAATGTTGTTAATAATGGCCACAGGCCAGACTCAACAGCTTA
TTACATTATTCAAACAGTTACCCATACTCCCTGAAAAAGAAATCAATGAAATAATAACTGCGCAGAATAGCGTTGGTACA
CCTGCTTTATTTCTGGCTATGATGAACGGACATACTGACAACGTAAAAATATTTATGCAAGAAATTCAGTCACTGGTAGA
TAATCATATCATTCATGAAGATAATCTGGTTAAATTACTGCAAACTAAAAGTGCTAACGAAACACCTGGACTCTATATCT
CCATGTTGTATGGATTCGATGAAATAATCGATATCTTTCTGAATGCATTAACCACTCCAATAGCACAAGATCTTTTAAAC
AAAAAAATGGTAATGAATATTTTAGCAATGAAAACACGTGATGGTGAGCCAGGATTATATGCCGCAATGGAAAATAATCA
CCCTTTGTGTGTCACACGGTTCCTCTCTAAAGTTTATGGAATCGCTGTTAAATATAACCTCAGCAAAATTAACATCATGG
ATTTATTAAAAGGCGCAACAGCACATGGAACCCCTGCTTTATACATCGCCATGAGCAAGGGTAATAAAGACGTCGTGTTA
TCTTATATATCAACGCTGGGTACTTTTGCAAAAAAATATTCTTTTAGTCAATGTCAGTTATTCACATTGTTGGCCGCTAA
AAATCATGACAACATGTCAGCTGTTCATATAGCCATTCATCATAATCATTATAAAACTGTAGAAACATATTATGCAGCTA
TAAATGTAATCAGCCAAAGCCTGAGCTTTAGTCCAGATGAACTACAGGCGTATTTATAA

Upstream 100 bases:

>100_bases
GACACAATTCTTATAGCAATTTTTCGTGCACATTTCGTTCTGGCGATAATAATTAATCATCATCCTCAAAACCTCCAGAC
ATATATAAGGCGAATAGATT

Downstream 100 bases:

>100_bases
CTAAATATTTACGATGTATATGTTGATACATATACTTTATTTTATTCATAAAACTCAGAAACAGTGATCAGGTGTACAAC
GCCACCCGACGGCTGTAATA

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MSQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLTYCVTQEFTANCRKISQNCYSTALFTIN
FATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAF
FLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWA
DMYVRNCAIAFLPLLPEGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEINEIITAQNSVGT
PALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQDLLN
KKMVMNILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGATAHGTPALYIAMSKGNKDVVL
SYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFSPDELQAYL

Sequences:

>Translated_632_residues
MSQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLTYCVTQEFTANCRKISQNCYSTALFTIN
FATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAF
FLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWA
DMYVRNCAIAFLPLLPEGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEINEIITAQNSVGT
PALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQDLLN
KKMVMNILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGATAHGTPALYIAMSKGNKDVVL
SYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFSPDELQAYL
>Mature_631_residues
SQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLTYCVTQEFTANCRKISQNCYSTALFTINF
ATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAFF
LQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIFF
CRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWAD
MYVRNCAIAFLPLLPEGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEINEIITAQNSVGTP
ALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQDLLNK
KMVMNILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGATAHGTPALYIAMSKGNKDVVLS
YISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFSPDELQAYL

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=581, Percent_Identity=29.776247848537, Blast_Score=251, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 70859; Mature: 70728

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00447 DNA_POLYMERASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLTYCVTQEF
CCCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TANCRKISQNCYSTALFTINFATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSIL
HHHHHHHHHHHHEEEEEEEEECCCCEECCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHH
DYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAFFLQSPSDAIFCRHLSLQYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEHHHHHHHHH
DSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHH
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTA
HHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCHHH
RGFLSLDKFISSGPDAQTWADMYVRNCAIAFLPLLPEGVPGAIFAGIASRMPFAPIHPSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCE
MLLIMATGQTQQLITLFKQLPILPEKEINEIITAQNSVGTPALFLAMMNGHTDNVKIFMQ
EEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH
EIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQDLLN
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHH
KKMVMNILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGAT
HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEEEECCEEHHHHHHCCCC
AHGTPALYIAMSKGNKDVVLSYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIH
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEEEEEEE
HNHYKTVETYYAAINVISQSLSFSPDELQAYL
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
SQNDIIIRTHYKSPHRMHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLTYCVTQEF
CCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
TANCRKISQNCYSTALFTINFATSPIHAENILITLHYKKEIISLLLETTPIKANHLRSIL
HHHHHHHHHHHHEEEEEEEEECCCCEECCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHH
DYIEQEQLTAENRNHCMKLSKKIHREKTIQPTVNLNGSAFFLQSPSDAIFCRHLSLQYAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEHHHHHHHHH
DSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRSLLRHPPAGSRVIASKDFGFALDIF
HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHH
FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSAYGQLNYVVSVYDPNDTNVAVRGTHRTA
HHHHHHCCCCCEEEEEEEECCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCHHH
RGFLSLDKFISSGPDAQTWADMYVRNCAIAFLPLLPEGVPGAIFAGIASRMPFAPIHPSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCE
MLLIMATGQTQQLITLFKQLPILPEKEINEIITAQNSVGTPALFLAMMNGHTDNVKIFMQ
EEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHH
EIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQDLLN
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHH
KKMVMNILAMKTRDGEPGLYAAMENNHPLCVTRFLSKVYGIAVKYNLSKINIMDLLKGAT
HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEEEECCEEHHHHHHCCCC
AHGTPALYIAMSKGNKDVVLSYISTLGTFAKKYSFSQCQLFTLLAAKNHDNMSAVHIAIH
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCEEEEEEEE
HNHYKTVETYYAAINVISQSLSFSPDELQAYL
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]