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The map label for this gene is chaC [H]

Identifier: 170682112

GI number: 170682112

Start: 1944426

End: 1945121

Strand: Reverse

Name: chaC [H]

Synonym: EcSMS35_1922

Alternate gene names: 170682112

Gene position: 1945121-1944426 (Counterclockwise)

Preceding gene: 170682769

Following gene: 170683203

Centisome position: 38.38

GC content: 55.46

Gene sequence:

>696_bases
GTGATAACGCGTGATTTCTTGATGAATGCCGATTGTAAAACGGCATTTGGTGCCATTGAAGAATCACTCTTATGGTCAGC
AGAGCAACGGGCGGCTTCGCTGGCGGCGACGCTGGCTTGTCGACCTGATGAGGGACCGGTGTGGATCTTCGGTTATGGAT
CGTTGATGTGGAATCCGGCACTGGAGTTTACCGAGTCGTGCACCGGTACACTGGTTGGATGGCATCGCGCGTTTTGCCTG
CGCCTGACCGCCGGGCGCGGGACTGCGCACCAGCCGGGACGGATGCTTGCACTGAAAGAGGGCGGACGCACCACAGGCGT
CGCCTATCGACTGCCAGAAGAGACGCTGGAGCAGGAACTAACCCTGTTGTGGAAGCGCGAGATGATTACCGGCTGTTATC
TGCCAACCTGGTGTCAGCTTGATCTTGATGATGGACGCACAGTAAACGCCATTGTGTTTATTATGGACCCGCGACATCCA
GAATATGAATCTGACACTCGCGCTCAGGTCATCGCGCCGTTGATTGCGGCGGCGAGCGGTCCGCTGGGAACCAACGCACA
ATACCTGTTTTCACTGGAACAGGAGCTTATCAAACTGGGAATGCAGGACGATGGGCTGAATGATTTGCTGGTATCGGTAA
AAAAACTGCTGGCGGAGAATTATCCGGATGCTGTGTTACGGCCGGGATTCGCCTGA

Upstream 100 bases:

>100_bases
TTGCATATTGTCCCGTTAGTGGTTTCAAAATGAGCAGTAAAAATGTCCGGAAGACACCAAAAAGTTGTCGCAGGGAAGTA
TGCAGTGGCGGAGGTGTAAG

Downstream 100 bases:

>100_bases
GTAAACTTCCCTCATAGTGGGGCGTCAGACGCCCCCTCAAACATTAAAATGTGAGCACTTTATCGGCTGACAGCGTCCAT
TGCGCCAGTTCAACAAGAGT

Product: chaC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCL
RLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHP
EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDAVLRPGFA

Sequences:

>Translated_231_residues
MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCL
RLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHP
EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDAVLRPGFA
>Mature_231_residues
MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCL
RLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHP
EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDAVLRPGFA

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=182, Percent_Identity=32.967032967033, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI56790287, Length=177, Percent_Identity=31.638418079096, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI145693119, Length=231, Percent_Identity=99.1341991341991, Blast_Score=473, Evalue=1e-135,
Organism=Caenorhabditis elegans, GI17560078, Length=186, Percent_Identity=30.1075268817204, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45553467, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24649389, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24649391, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24649393, Length=211, Percent_Identity=30.3317535545024, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24641578, Length=188, Percent_Identity=30.3191489361702, Blast_Score=80, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 25543; Mature: 25543

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPA
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCH
LEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQEL
HHHHHCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCHHHHHHHH
TLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASG
HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDAVLRPGFA
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCC
>Mature Secondary Structure
MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPA
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCH
LEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQEL
HHHHHCCCHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEECCHHHHHHHH
TLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASG
HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENYPDAVLRPGFA
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]