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The map label for this gene is ydjY [H]

Identifier: 170682069

GI number: 170682069

Start: 1424306

End: 1424983

Strand: Reverse

Name: ydjY [H]

Synonym: EcSMS35_1439

Alternate gene names: 170682069

Gene position: 1424983-1424306 (Counterclockwise)

Preceding gene: 170683801

Following gene: 170682770

Centisome position: 28.12

GC content: 48.23

Gene sequence:

>678_bases
ATGTTGCAACATTATTCAGTGTCATGGAAAAAAGGACTGACTGCACTCTGCTTACTGGCTGTTGCTGGGCTTAGCGGCTG
CGATCAAAAAGAGAATGCGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGTGTCGATGCCAATA
ACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAGAT
GGCTCCAACGGACATAAATCGCTGTTTATGGGTTATGCGACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGG
TACACCGGGCGAAAACATGACGATGGATAATAAAGAAACGACTCATGTCACAGGCAGCAAACTGGAAATTTCGGTCAACT
GGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGC
GGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGCTGCCTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAA
TGCAACATACACTTATGGTGCGGTTGAAAAACGCGGTGAAGTTAAATTTAAAGGCAATGCCTCGGTTCTCCCGGCGGATA
ACACGCTGGCAACGGTTACCTTTAAAATCACCGAATAA

Upstream 100 bases:

>100_bases
CTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCTCGCCGCAGCCCACTTACTCACCC
AAAAAATGAAGGATAGAACG

Downstream 100 bases:

>100_bases
AGCCAGGATAAAGGATGATGAAGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCT
ATGCTGCTGGCATGGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLEISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE

Sequences:

>Translated_225_residues
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLEISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
>Mature_225_residues
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKD
GSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLEISVNWQGAAKAYSFDEVIVDSNGKKLDMRFG
GNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI87081965, Length=225, Percent_Identity=98.2222222222222, Blast_Score=461, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24200; Mature: 24200

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLEISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MLQHYSVSWKKGLTALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEE
VQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKET
EEECCEEECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCC
THVTGSKLEISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC
EEECCCEEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCEEEEEECCC
PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE
CEEEECCCEEEECCCCCCCCEEECCCCEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]