| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yciQ [H]
Identifier: 170681982
GI number: 170681982
Start: 1887771
End: 1889666
Strand: Reverse
Name: yciQ [H]
Synonym: EcSMS35_1865
Alternate gene names: 170681982
Gene position: 1889666-1887771 (Counterclockwise)
Preceding gene: 170681810
Following gene: 170682451
Centisome position: 37.28
GC content: 47.15
Gene sequence:
>1896_bases ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGTTGGGCTTTTTTTCTCTTCGTTGAGTTATGCGAAAAACACGGA GATCCCTTCTTATGAAGAAGGGATCTCTCTCTTTGATGTTGAAGCCACTCTGCAACCGGATGGGGTGCTCGACATCAAAG AAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGATTTTATCGTGATTTACCACGACTCTGGATGCAGCCT GATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTG GCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATT ATCAGGTTAAAAATGCTTTCCTGCGTGAAGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTT GAAATTTATAAGACCCTATTTTCACTCAAGTTGCCAGATATTGCGGGTAATCCATTTAGCGAAATCGATCTCTTTACTGG AGAAGAGGGCGACACATATCGAAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCGATCCGTTTTATCGTGAAG ATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTGGTAATGCCCCGGCACCACAAACGACGAATATTTTCAGCCAT CTTCTTTTACCCTCTACGTCATCGTTGTTAATTTGGTTTCCGTGTCTCTTCCTGGCGTGTGGATGGTTATATCTCTGGAA GCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACACCCGGCATGTTACGTC TCGATGCGAAGCTGGTTTACGACGATAAAGGTTTTTGTGCCGATATCGTAAATCTGATTGTTAAAGGAAAAATTCATCTG GAAGATCAGTATGACAAGAACCAGCAAATCCTGATTTGTGTTAATGAAGGCGCGACCAGAAATAATGCGGTATTACTGCC CGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTAC GCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTATCGACCAGATACGTTTTTGCAA TGGGGCGGAATGGCGATATTGGCGGTCATTCTCTACGGTAACCTGAGTCCCGTAGGTTGGGCAGGAATGAGTCTGGTTGG CGATATGTTTATTATGATCTGCTGGCTTCTTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACA AGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCGCTGATTTGTTCAGGCGTGGCCTTTTATTCTCTCTATATC AATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTAGCGCTGTTTTCCTGACCGGTTATCTCACTGG CATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATC TTGCGCGTAAAGAGGCAGCAACACACAGTGGGCGGCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGT TGGGCAGTCTCGGCAAACCTTGGAAAAGAATGGGCAGCACGTATCACCCCATCACTCACAGCGGCTGTTCACGCCCCGGA AATTGCCCGTAGTGGCGTTTTGTTTTCATTACAGATGCACCTGAGCCTGGGGGCCAATACCAGTTTGTTGGGGCGAAGTT ATTCCGGTGGTGGTGCTGGCGGCGGGGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA
Upstream 100 bases:
>100_bases GGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTG CGTTCCACGGATGGAAGACT
Downstream 100 bases:
>100_bases TTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACG TCGAGTCGTTTACTTAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MAGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQ WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
Sequences:
>Translated_631_residues MAGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF EIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL EDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQ WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG WAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW >Mature_630_residues AGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPD GDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFE IYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSHL LLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLE DQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQW GGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYIN VGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGW AVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=615, Percent_Identity=95.1219512195122, Blast_Score=1185, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 71256; Mature: 71125
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPFS HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGMAILAVILYGNLSPVGW CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMH HCCCCCCCCCCCCCCCEEEEEEHCCCCCHHHHHHCCCCHHHEECCCHHHHCCEEEEEEEE LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW EEECCCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPFS HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE DDKGFCADIVNLIVKGKIHLEDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKG CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHCCC DKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGMAILAVILYGNLSPVGW CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCH AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAA ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH THSGRRRKGETRKLDYALLGWAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMH HCCCCCCCCCCCCCCCEEEEEEHCCCCCHHHHHHCCCCHHHEECCCHHHHCCEEEEEEEE LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW EEECCCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]